RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 GPS2Q13227 327 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 KLF1Q13351 362 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PPIGQ13427 754 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 MRPL58Q14197 206 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 KRT81Q14533 505 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PPP1R7Q15435 360 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 TAZQ16635 292 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 LRRC26Q2I0M4 334 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 USP41Q3LFD5 358 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ARL13BQ3SXY8 428 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC25A52Q3SY17 297 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCDC14Q49A88 953 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CTXN3Q4LDR2 81 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PAN2Q504Q3 1202 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC39A12Q504Y0 691 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 DCAF6Q58WW2 860 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 RAB41Q5JT25 222 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ERMARDQ5T6L9 678 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 KIAA0319Q5VV43 1072 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PM20D1Q6GTS8 502 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 SCYL2Q6P3W7 929 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 DRICH1Q6PGQ1 229 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCDC137Q6PK04 289 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CEP128Q6ZU80 1094 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ANKS3Q6ZW76 656 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 BZW1Q7L1Q6 419 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ADAT2Q7Z6V5 191 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CPNE8Q86YQ8 564 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCDC105Q8IYK2 499 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 GPR65Q8IYL9 337 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CMTR2Q8IYT2 770 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ARHGAP18Q8N392 663 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ARFGAP1Q8N6T3 406 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 EMC1Q8N766 993 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PRELID2Q8N945 189 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 BBOF1Q8ND07 529 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ATL2Q8NHH9 583 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CCHCR1Q8TD31 782 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 DIS3LQ8TF46 1054 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 HASPINQ8TF76 798 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM172AQ8WUF8 416 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 SEC14L1Q92503 715 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 TOP1MTQ969P6 601 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 NT5C3BQ969T7 300 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM149B1Q96BN6 582 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 C8orf48Q96LL4 319 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF558Q96NG5 402 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC2A13Q96QE2 648 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PNKPQ96T60 521 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC9A7Q96T83 725 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PKMYT1Q99640 499 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 SMOQ99835 787 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 RTP3Q9BQQ7 232 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ERP44Q9BS26 406 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 TTPALQ9BTX7 342 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 HEMGNQ9BXL5 484 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 DDX47Q9H0S4 455 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 TSPYL1Q9H0U9 437 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 FBXO44Q9H4M3 255 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZWILCHQ9H900 591 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 VIPAS39Q9H9C1 493 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 LIN7BQ9HAP6 207 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 POPDC2Q9HBU9 364 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 EPB41L5Q9HCM4 733 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 NGRNQ9NPE2 291 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 IL23AQ9NPF7 189 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PRDM10Q9NQV6 1147 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 GDF3Q9NR23 364 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 DZANK1Q9NVP4 752 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 SMARCAL1Q9NZC9 954 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 HSFX1Q9UBD0 423 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CACNG4Q9UBN1 327 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 TJP2Q9UDY2 1190 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 DNAJB4Q9UDY4 337 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PRKAG2Q9UGJ0 569 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PCSK1NQ9UHG2 260 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 AMACRQ9UHK6 382 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 MAFFQ9ULX9 164 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PRG3Q9Y2Y8 225 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 VWA8A3KMH1 1905 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF638Q14966 1978 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 TRIM43BA6NCK2 446 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 C3orf70A6NLC5 250 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 HHLA1C9JL84 531 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 PI4K2BG5E9Z4 385 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 H3BRJ5 948 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 GNB5O14775 395 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 TTI1O43156 1089 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 TBC1D4O60343 1298 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 B4GALT3O60512 393 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 GRAP2O75791 330 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 BEST1O76090 585 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 ECEL1O95672 775 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 FGBP02675 491 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 LTFP02788 710 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 ITGAVP06756 1048 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 HSPA1AP0DMV8 641 aaKnown RBP4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 HSPA1BP0DMV9 641 aaKnown RBP4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC2A3P11169 496 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 NID1P14543 1247 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms