RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 MARCH2Q9P0N8 246 aa10.3□□□□□ -0.76
CCDC66-207ENST00000439445 EIF2B4Q9UI10 523 aaKnown RBP10.3□□□□□ -0.76
CCDC66-207ENST00000439445 STRIP2Q9ULQ0 834 aa10.3□□□□□ -0.76
CCDC66-207ENST00000439445 MAPK8IP1Q9UQF2 711 aa10.3□□□□□ -0.76
CCDC66-207ENST00000439445 TRAF3IP3Q9Y228 551 aa10.3□□□□□ -0.76
CCDC66-207ENST00000439445 APOBEC2Q9Y235 224 aaKnown RBP10.3□□□□□ -0.76
CCDC66-207ENST00000439445 NFE2L3Q9Y4A8 694 aa10.3□□□□□ -0.76
CCDC66-207ENST00000439445 SLC12A8A0AV02 714 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 METTL12A8MUP2 240 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 BCAT2O15382 392 aaPredicted RBP10.29□□□□□ -0.76
CCDC66-207ENST00000439445 TIMM44O43615 452 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 EPHX1P07099 455 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 PFKFB1P16118 471 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 RPL13P26373 211 aaKnown RBP10.29□□□□□ -0.76
CCDC66-207ENST00000439445 PSMC2P35998 433 aaKnown RBP10.29□□□□□ -0.76
CCDC66-207ENST00000439445 MATKP42679 507 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 YWHAGP61981 247 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC66-207ENST00000439445 ADAM9Q13443 819 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 ENPP2Q13822 863 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 DCAF12L1Q5VU92 463 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 SERPINA13PQ6UXR4 307 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 ANKS1BQ7Z6G8 1248 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 SLCO6A1Q86UG4 719 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 FAM186BQ8IYM0 893 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 ARHGAP18Q8N392 663 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 SORCS1Q8WY21 1168 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 SLC2A11Q9BYW1 496 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 IL21RQ9HBE5 538 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 USP25Q9UHP3 1055 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 CLEC4EQ9ULY5 219 aa10.29□□□□□ -0.76
CCDC66-207ENST00000439445 NUMA1Q14980 2115 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 TSPAN3O60637 253 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 CER1O95813 267 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 CAPNS1P04632 268 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 MYL1P05976 194 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 CMA1P23946 247 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 PRKCHP24723 683 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 COPAP53621 1224 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 SLC8A3P57103 927 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 EIF4HQ15056 248 aaKnown RBP10.28□□□□□ -0.76
CCDC66-207ENST00000439445 HLA-BQ31612 363 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 C19orf48Q6RUI8 117 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 CCNI2Q6ZMN8 369 aaPredicted RBP10.28□□□□□ -0.76
CCDC66-207ENST00000439445 GLRX5Q86SX6 157 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 PIGZQ86VD9 579 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 CPXM2Q8N436 756 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 TTC39CQ8N584 583 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 RHBDD1Q8TEB9 315 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 SNX19Q92543 992 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 SNX21Q969T3 373 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 UBXN6Q9BZV1 441 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 CCDC86Q9H6F5 360 aaKnown RBP10.28□□□□□ -0.76
CCDC66-207ENST00000439445 TMEM8AQ9HCN3 771 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 TM7SF3Q9NS93 570 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 CISHQ9NSE2 258 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 PCOLCE2Q9UKZ9 415 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 PLA2G4CQ9UP65 541 aa10.28□□□□□ -0.76
CCDC66-207ENST00000439445 ADAMTS20P59510 1910 aa10.27□□□□□ -0.76
CCDC66-207ENST00000439445 PLXNB3Q9ULL4 1909 aa10.27□□□□□ -0.76
CCDC66-207ENST00000439445 A0A1B0GVT2 93 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 LCE2BO14633 110 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 CBFA2T3O75081 653 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 DXOO77932 396 aaKnown RBP10.27□□□□□ -0.77
CCDC66-207ENST00000439445 RHOBTB3O94955 611 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 ZBED1O96006 694 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 IGLV3-19P01714 112 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 ZNF883P0CG24 379 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 HLA-EP13747 358 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 GTF2H1P32780 548 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 HARS2P49590 506 aaKnown RBP10.27□□□□□ -0.77
CCDC66-207ENST00000439445 CSNK1EP49674 416 aaKnown RBP10.27□□□□□ -0.77
CCDC66-207ENST00000439445 TKTL1P51854 596 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 RAD23BP54727 409 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 BNC1Q01954 994 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 PKP1Q13835 747 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 ACAP1Q15027 740 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 NFIL3Q16649 462 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 FNDC3BQ53EP0 1204 aaKnown RBP10.27□□□□□ -0.77
CCDC66-207ENST00000439445 MPPE1Q53F39 396 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 RAB41Q5JT25 222 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 TMEM215Q68D42 235 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 KRT39Q6A163 491 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 PM20D1Q6GTS8 502 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 IL27RAQ6UWB1 636 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 ANKRD52Q8NB46 1076 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 SLC4A11Q8NBS3 891 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 OR2T3Q8NH03 318 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 NDRG1Q92597 394 aaKnown RBP10.27□□□□□ -0.77
CCDC66-207ENST00000439445 SEMA4DQ92854 862 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 PLD4Q96BZ4 506 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 TMEM176AQ96HP8 235 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 ARID3AQ99856 593 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 RAB20Q9NX57 234 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 KIAA1522Q9P206 1035 aaPredicted RBP10.27□□□□□ -0.77
CCDC66-207ENST00000439445 FNDC3AQ9Y2H6 1198 aaKnown RBP10.27□□□□□ -0.77
CCDC66-207ENST00000439445 CKAP5Q14008 2032 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 KALRNO60229 2985 aa10.27□□□□□ -0.77
CCDC66-207ENST00000439445 URB1O60287 2271 aaKnown RBP10.27□□□□□ -0.77
CCDC66-207ENST00000439445 PTPRBP23467 1997 aa10.26□□□□□ -0.77
CCDC66-207ENST00000439445 ATXN1LP0C7T5 689 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms