RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CDC42EP4Q9H3Q1 356 aaKnown RBP16.24■□□□□ 0.19
PTPN13-204ENST00000436978 COMMD8Q9NX08 183 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 SPEF2Q9C093 1822 aa16.24■□□□□ 0.19
PTPN13-204ENST00000436978 A0A088AWK7 358 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 ZNF10P21506 573 aaPredicted RBP16.23■□□□□ 0.19
PTPN13-204ENST00000436978 EIF4BP23588 611 aaKnown RBP16.23■□□□□ 0.19
PTPN13-204ENST00000436978 WEE1P30291 646 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 CYP2C18P33260 490 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 NCF4Q15080 339 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 ATXN3LQ9H3M9 355 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 TAS2R13Q9NYV9 303 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 ILDR2Q71H61 639 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 METTL3Q86U44 580 aaKnown RBP16.23■□□□□ 0.19
PTPN13-204ENST00000436978 ZNF606Q8WXB4 792 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 TBC1D12O60347 775 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 GNRH1P01148 92 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 KPNB1Q14974 876 aaKnown RBP16.23■□□□□ 0.19
PTPN13-204ENST00000436978 SGF29Q96ES7 293 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 TMBIM4Q9HC24 238 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 ANKRD65E5RJM6 399 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 NR5A2O00482 541 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 KATNA1O75449 491 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 EIF2S1P05198 315 aaKnown RBP16.23■□□□□ 0.19
PTPN13-204ENST00000436978 POU6F1Q14863 301 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 CDCA5Q96FF9 252 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 KCTD14Q9BQ13 255 aaPredicted RBP16.23■□□□□ 0.19
PTPN13-204ENST00000436978 AGXT2Q9BYV1 514 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 SHPRHQ149N8 1683 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 GHRP10912 638 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 HOXB8P17481 243 aaPredicted RBP16.23■□□□□ 0.19
PTPN13-204ENST00000436978 VGLL4Q14135 290 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 KAZALD1Q96I82 304 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 V9GYQ6 96 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 MYH13Q9UKX3 1938 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 HALP42357 657 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 NFYCQ13952 458 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 C15orf52Q6ZUT6 534 aaKnown RBP16.23■□□□□ 0.19
PTPN13-204ENST00000436978 LPCAT1Q8NF37 534 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 AHCYL2Q96HN2 611 aaKnown RBP16.23■□□□□ 0.19
PTPN13-204ENST00000436978 IL1RAPL1Q9NZN1 696 aa16.23■□□□□ 0.19
PTPN13-204ENST00000436978 SF3B1O75533 1304 aaKnown RBP eCLIP16.23■□□□□ 0.19
PTPN13-204ENST00000436978 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 CCDC130P13994 396 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 GLRBP48167 497 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 APOBEC3HQ6NTF7 200 aaKnown RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 EDEM1Q92611 657 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 CAVIN3Q969G5 261 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 AVENQ9NQS1 362 aaPredicted RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 MRPL17Q9NRX2 175 aaKnown RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 FBXL21Q9UKT6 434 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 DNPEPQ9ULA0 475 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 LGALS2P05162 132 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 MRPS6P82932 125 aaKnown RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 SETMARQ53H47 684 aaPredicted RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 PTAR1Q7Z6K3 402 aaPredicted RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 VPS33AQ96AX1 596 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 PNKPQ96T60 521 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 MSRAQ9UJ68 235 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 ADM5C9JUS6 153 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 SLC39A12Q504Y0 691 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 SRLQ86TD4 932 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 SCUBE1Q8IWY4 988 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 TMEM199Q8N511 208 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 RAD21L1Q9H4I0 556 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 ATP13A1Q9HD20 1204 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 AP4S1Q9Y587 144 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 H3BMM5 538 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 ACADSP16219 412 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 NFIL3Q16649 462 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 MAP4K3Q8IVH8 894 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 IL25Q9H293 177 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 TAGLN3Q9UI15 199 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 CPA3P15088 417 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 KRR1Q13601 381 aaKnown RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 CBWD3Q5JTY5 395 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 CBWD5Q5RIA9 395 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 TRMT11Q7Z4G4 463 aaKnown RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 REXO1L1PQ8IX06 675 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 HEY2Q9UBP5 337 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 PSMC6P62333 389 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 BCL2L1Q07817 233 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 ZNF513Q8N8E2 541 aaPredicted RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 CNBD2Q96M20 576 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 UBA2Q9UBT2 640 aaPredicted RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 ATXN3P54252 364 aaPredicted RBP16.22■□□□□ 0.19
PTPN13-204ENST00000436978 ATAD3BQ5T9A4 648 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 MKL1Q969V6 931 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 ACTR8Q9H981 624 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 KLHL28Q9NXS3 571 aa16.22■□□□□ 0.19
PTPN13-204ENST00000436978 ZNF862O60290 1169 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 GTF2E2P29084 291 aaKnown RBP16.21■□□□□ 0.19
PTPN13-204ENST00000436978 C18orf25Q96B23 403 aaPredicted RBP16.21■□□□□ 0.19
PTPN13-204ENST00000436978 CAB39Q9Y376 341 aaPredicted RBP16.21■□□□□ 0.19
PTPN13-204ENST00000436978 MMP13P45452 471 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 ADRM1Q16186 407 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 SLC2A14Q8TDB8 520 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.21■□□□□ 0.19
PTPN13-204ENST00000436978 PCDHA3Q9Y5H8 950 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 MRPS15P82914 257 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms