RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 HBS1LQ9Y450 684 aaKnown RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 USP3Q9Y6I4 520 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 CFAP47Q6ZTR5 3102 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 THADAQ6YHU6 1953 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 FAM237AA0A1B0GTK4 181 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 A0A1B0GTW7 788 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 WASH3PC4AMC7 463 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 PSMA7O14818 248 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 XPO1O14980 1071 aaKnown RBP8.1□□□□□ -1.11
VPS50-203ENST00000436177 TSPAN3O60637 253 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 CER1O95813 267 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 AVPP01185 164 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 KLKB1P03952 638 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 CISD3P0C7P0 127 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 IL12RB1P42701 662 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 SLC11A2P49281 568 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 RAD23BP54727 409 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 FKBP3Q00688 224 aaKnown RBP8.1□□□□□ -1.11
VPS50-203ENST00000436177 ADIGQ0VDE8 80 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 GRIK2Q13002 908 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 CUL2Q13617 745 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 ZNF234Q14588 700 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 GEN1Q17RS7 908 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 TTC31Q49AM3 519 aaPredicted RBP8.1□□□□□ -1.11
VPS50-203ENST00000436177 FYB2Q5VWT5 728 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 ARHGAP17Q68EM7 881 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 IL27RAQ6UWB1 636 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 FAM124AQ86V42 546 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 TMPRSS6Q8IU80 811 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 FMNL3Q8IVF7 1028 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 SLC41A1Q8IVJ1 513 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 NAXDQ8IW45 347 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 SMYD4Q8IYR2 804 aaPredicted RBP8.1□□□□□ -1.11
VPS50-203ENST00000436177 CPXM2Q8N436 756 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 ZNF557Q8N988 423 aaPredicted RBP8.1□□□□□ -1.11
VPS50-203ENST00000436177 SLC4A11Q8NBS3 891 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 CADM4Q8NFZ8 388 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 OR2I1PQ8NGU4 316 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 WFIKKN2Q8TEU8 576 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 SEMA4DQ92854 862 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 SMARCE1Q969G3 411 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 ZNF419Q96HQ0 510 aaPredicted RBP8.1□□□□□ -1.11
VPS50-203ENST00000436177 NUP58Q9BVL2 599 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 LHX5Q9H2C1 402 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 GOLPH3LQ9H4A5 285 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 FBRSQ9HAH7 460 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 DNAAF2Q9NVR5 837 aaKnown RBP8.1□□□□□ -1.11
VPS50-203ENST00000436177 THAP10Q9P2Z0 257 aaPredicted RBP8.1□□□□□ -1.11
VPS50-203ENST00000436177 TSPAN16Q9UKR8 245 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 ZMIZ1Q9ULJ6 1067 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 APOBEC2Q9Y235 224 aaKnown RBP8.1□□□□□ -1.11
VPS50-203ENST00000436177 NFE2L3Q9Y4A8 694 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 NEUROG3Q9Y4Z2 214 aa8.1□□□□□ -1.11
VPS50-203ENST00000436177 ASCC3Q8N3C0 2202 aaKnown RBP8.09□□□□□ -1.11
VPS50-203ENST00000436177 KIAA1549LQ6ZVL6 1849 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 BCAT2O15382 392 aaPredicted RBP8.09□□□□□ -1.11
VPS50-203ENST00000436177 WFS1O76024 890 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 LATS1O95835 1130 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 ATP5BP06576 529 aaKnown RBP8.09□□□□□ -1.11
VPS50-203ENST00000436177 PRKCHP24723 683 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 TPMTP51580 245 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 ST8SIA6P61647 398 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 LRRC63Q05C16 580 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 PDE4CQ08493 712 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 LRMPQ12912 555 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 PNOCQ13519 176 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 TEAD4Q15561 434 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 TRIP6Q15654 476 aaKnown RBP8.09□□□□□ -1.11
VPS50-203ENST00000436177 CCDC40Q4G0X9 1142 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 RAB41Q5JT25 222 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
VPS50-203ENST00000436177 BSPRYQ5W0U4 402 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 NUGGCQ68CJ6 796 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 PIP4P1Q86T03 277 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 AHI1Q8N157 1196 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 ENGASEQ8NFI3 743 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 GANCQ8TET4 914 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 SETD7Q8WTS6 366 aaKnown RBP8.09□□□□□ -1.11
VPS50-203ENST00000436177 EDEM1Q92611 657 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 TMA16Q96EY4 203 aaKnown RBP8.09□□□□□ -1.11
VPS50-203ENST00000436177 NT5C1BQ96P26 610 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 GSDMAQ96QA5 445 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 DDX50Q9BQ39 737 aaKnown RBP8.09□□□□□ -1.11
VPS50-203ENST00000436177 MKRN2Q9H000 416 aaKnown RBP8.09□□□□□ -1.11
VPS50-203ENST00000436177 PCED1AQ9H1Q7 454 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 GDPD2Q9HCC8 539 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 METTL14Q9HCE5 456 aaKnown RBP8.09□□□□□ -1.11
VPS50-203ENST00000436177 ABCC13Q9NSE7 274 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 ABCB8Q9NUT2 735 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 USP36Q9P275 1121 aaKnown RBP8.09□□□□□ -1.11
VPS50-203ENST00000436177 FBXO10Q9UK96 956 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 HCN2Q9UL51 889 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 KIAA1257Q9ULG3 409 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 CEP83Q9Y592 693 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 EML5Q05BV3 1969 aa8.09□□□□□ -1.11
VPS50-203ENST00000436177 M0QYV0 167 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 SART1O43290 800 aaKnown RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 MSI1O43347 362 aaKnown RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 SH3BP5O60239 455 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 RNASEH1O60930 286 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms