RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 OXER1Q8TDS5 423 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 NSUN4Q96CB9 384 aaKnown RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 SH2D3AQ9BRG2 576 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 ATP13A1Q9HD20 1204 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 hCG_2014768A0A024R1R8 64 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 QSOX1O00391 747 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 RBMXL2O75526 392 aaKnown RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 CSF1RP07333 972 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 PTPN1P18031 435 aaKnown RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 BST2Q10589 180 aaKnown RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 FAM98BQ52LJ0 330 aaKnown RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 ARMC3Q5W041 872 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 FAM171BQ6P995 826 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 LZTR1Q8N653 840 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF671Q8TAW3 534 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 FICDQ9BVA6 458 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 RIBC2Q9H4K1 309 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 HMG20AQ9NP66 347 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 VSTM5A8MXK1 200 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 SKIV2L2P42285 1042 aaKnown RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 RAB2AP61019 212 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 VAC14Q08AM6 782 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 TAB1Q15750 504 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 ARMC12Q5T9G4 340 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 PAGE2Q7Z2X7 111 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF786Q8N393 782 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 HASPINQ8TF76 798 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 KCTD14Q9BQ13 255 aaPredicted RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 ELOVL4Q9GZR5 314 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 MTFR1LQ9H019 292 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 TAS2R13Q9NYV9 303 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 PRODHO43272 600 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 RASA1P20936 1047 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 CTNNB1P35222 781 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 AP1S2P56377 157 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 LONRF1Q17RB8 773 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 ADGRG2Q8IZP9 1017 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 LPCAT1Q8NF37 534 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 TRIM9Q9C026 710 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 SENP6Q9GZR1 1112 aaPredicted RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 ASAH2Q9NR71 780 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 ATAD3AQ9NVI7 634 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 GPRC5DQ9NZD1 345 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 RPA1P27694 616 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 BACE1P56817 501 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 KYNUQ16719 465 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 GLT6D1Q7Z4J2 308 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 SGMS1Q86VZ5 419 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 FAM228AQ86W67 206 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 APBB2Q92870 758 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 MRPS23Q9Y3D9 190 aaKnown RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 MAGEB3O15480 346 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 VTNP04004 478 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 KLRC1P26715 233 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 SNRPD1P62314 119 aaKnown RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 FBXO47Q5MNV8 452 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 LENG9Q96B70 501 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 APOL4Q9BPW4 351 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 ADGRA3Q8IWK6 1321 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 ANXA6P08133 673 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 H2AFXP16104 143 aaPredicted RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 NFKB1P19838 968 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 KELP23276 732 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 MLH1P40692 756 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 FGD3Q5JSP0 725 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 ZNF558Q96NG5 402 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 PHF20Q9BVI0 1012 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 FANCFQ9NPI8 374 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 DDX43Q9NXZ2 648 aaKnown RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 ESYT3A0FGR9 886 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 NR5A2O00482 541 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 MYL12BO14950 172 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 CLUP10909 449 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 CASP1P29466 404 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 PTSQ03393 145 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 NKX2-3Q8TAU0 364 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 RHBGQ9H310 441 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 MRPS33Q9Y291 106 aaKnown RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 MCIDASD6RGH6 385 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 XPO1O14980 1071 aaKnown RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 PDE9AO76083 593 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 PNMA6AP0CW24 399 aaPredicted RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 DNERQ8NFT8 737 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 TSPAN14Q8NG11 270 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 CAPSLQ8WWF8 208 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 C9orf72Q96LT7 481 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 C2orf49Q9BVC5 232 aaPredicted RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 PP2D1A8MPX8 630 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 TGFB3P10600 412 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 RPL3P39023 403 aaKnown RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 AGBL2Q5U5Z8 902 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 RBM43Q6ZSC3 357 aaKnown RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 ATL1Q8WXF7 558 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 TMCO1Q9UM00 188 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 GPSM3Q9Y4H4 160 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 CD3EAPO15446 510 aaKnown RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 ATG7O95352 703 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 CATP04040 527 aaKnown RBP11.44□□□□□ -0.58
SCN4A-201ENST00000435607 PDHBP11177 359 aa11.44□□□□□ -0.58
SCN4A-201ENST00000435607 TFE3P19532 575 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms