RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 H7C0C1 242 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 SERPINI2O75830 405 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 S100A1P23297 94 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 ATP5OP48047 213 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 TUFMP49411 452 aaKnown RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 OGDHQ02218 1023 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 SLC10A2Q12908 348 aaPredicted RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 SLC9B1Q4ZJI4 515 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 BRDTQ58F21 947 aaPredicted RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 TMEM198Q66K66 360 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 PPP4R4Q6NUP7 873 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 PRR23BQ6ZRT6 265 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 FIBCD1Q8N539 461 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 CAPSLQ8WWF8 208 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 AGAP3Q96P47 875 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 CENPOQ9BU64 300 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 DRG1Q9Y295 367 aaKnown RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 ATAD5Q96QE3 1844 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 SNNO75324 88 aaPredicted RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 ITGAVP06756 1048 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 DPYSL3Q14195 570 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 PPM1JQ5JR12 505 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 CHERPQ8IWX8 916 aaKnown RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 NACC1Q96RE7 527 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 NOL11Q9H8H0 719 aaKnown RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 NUB1Q9Y5A7 615 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 PCDHB2Q9Y5E7 798 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 TNNI1P19237 187 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 ARRB2P32121 409 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 RPL26P61254 145 aaKnown RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 MAPK11Q15759 364 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 INAQ16352 499 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 DEPDC1Q5TB30 811 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 DNAJC24Q6P3W2 148 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 MON1BQ7L1V2 547 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 ZC3H7AQ8IWR0 971 aaKnown RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 KYQ8NBH2 561 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF280CQ8ND82 737 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 RTFDC1Q9BY42 306 aaPredicted RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 DDX56Q9NY93 547 aaKnown RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 SEL1LQ9UBV2 794 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 SLIT2O94813 1529 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 GNA15P30679 374 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 SOX11P35716 441 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 CDKN2BP42772 138 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 FSTL1Q12841 308 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 SPIDRQ14159 915 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 OTOP1Q7RTM1 612 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 BTLAQ7Z6A9 289 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 SLC35B2Q8TB61 432 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 SPATA18Q8TC71 538 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 MAPK15Q8TD08 544 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 NKD2Q969F2 451 aaPredicted RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 COG4Q9H9E3 785 aa7.66□□□□□ -1.18
CPSF6-202ENST00000435070 CLK4Q9HAZ1 481 aaKnown RBP7.66□□□□□ -1.18
CPSF6-202ENST00000435070 SPATA31A5Q5VU36 1347 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 SPATA31A6Q5VVP1 1343 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 SPATA31A7Q8IWB4 1347 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 AQP9O43315 295 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 SLC4A1P02730 911 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 ZNF26P17031 533 aaPredicted RBP7.65□□□□□ -1.18
CPSF6-202ENST00000435070 MZF1P28698 734 aaPredicted RBP7.65□□□□□ -1.18
CPSF6-202ENST00000435070 TPTEP56180 551 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 IKBKEQ14164 716 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 TRIM60Q495X7 471 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 TRAPPC3LQ5T215 181 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 LAYNQ6UX15 382 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 ZBTB49Q6ZSB9 765 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 VASH1Q7L8A9 365 aaPredicted RBP7.65□□□□□ -1.18
CPSF6-202ENST00000435070 OFCC1Q8IZS5 231 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 NPAS2Q99743 824 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 BCAP29Q9UHQ4 241 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 MYH9P35579 1960 aaKnown RBP7.65□□□□□ -1.18
CPSF6-202ENST00000435070 CYP3A7-CYP3A51PA0A087WV96 503 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 HSPA4LO95757 839 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 CYP3A7P24462 503 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 PRDX6P30041 224 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 ECE1P42892 770 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 QARSP47897 775 aaKnown RBP7.65□□□□□ -1.18
CPSF6-202ENST00000435070 ACADVLP49748 655 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 SLC15A2Q16348 729 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 NIPAL1Q6NVV3 410 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 LYSMD3Q7Z3D4 306 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 DEPDC1BQ8WUY9 529 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 ARPC5LQ9BPX5 153 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 MTG1Q9BT17 334 aaPredicted RBP7.65□□□□□ -1.18
CPSF6-202ENST00000435070 WDR18Q9BV38 432 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 HIPK3Q9H422 1215 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 SLC9A2Q9UBY0 812 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 IP6K2Q9UHH9 426 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 SORCS3Q9UPU3 1222 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 DGKBQ9Y6T7 804 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 H3BMQ9 156 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 PSMD11O00231 422 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 SOX10P56693 466 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 ARPC4P59998 168 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 GTF2IP78347 998 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 CRADDP78560 199 aa7.65□□□□□ -1.18
CPSF6-202ENST00000435070 PTP4A2Q12974 167 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms