RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 GDAP2Q9NXN4 497 aa12.52□□□□□ -0.4
CLDN4-203ENST00000435050 SLC17A6Q9P2U8 582 aa12.52□□□□□ -0.4
CLDN4-203ENST00000435050 ZNF646O15015 1829 aaPredicted RBP12.52□□□□□ -0.4
CLDN4-203ENST00000435050 A0A0A0MRY4 1105 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 SDR42E2A6NKP2 422 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 C3orf70A6NLC5 250 aaPredicted RBP12.52□□□□□ -0.41
CLDN4-203ENST00000435050 CHADO15335 359 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 UGT1A9O60656 530 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 ABHD2P08910 425 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 SLC10A3P09131 477 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 SCTRP47872 440 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 RAB27AP51159 221 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 ZBTB6Q15916 424 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 CCDC6Q16204 474 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 TRMT10BQ6PF06 316 aaKnown RBP12.52□□□□□ -0.41
CLDN4-203ENST00000435050 UNC5BQ8IZJ1 945 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 ATAD1Q8NBU5 361 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 C3orf58Q8NDZ4 430 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 SPATA13Q96N96 652 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 SMOQ99835 787 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 UNKQ9C0B0 810 aaKnown RBP12.52□□□□□ -0.41
CLDN4-203ENST00000435050 MANSC1Q9H8J5 431 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 UGT1A7Q9HAW7 530 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 UGT1A10Q9HAW8 530 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 UGT1A8Q9HAW9 530 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 RNF186Q9NXI6 227 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 RABGEF1Q9UJ41 708 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.52□□□□□ -0.41
CLDN4-203ENST00000435050 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 CLUHO75153 1309 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.52□□□□□ -0.41
CLDN4-203ENST00000435050 SNX3O60493 162 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 SOAT2O75908 522 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 ERVK-10P10266 1014 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 NR2C2P49116 596 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 CCL23P55773 120 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 DAOAP59103 153 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 DEFB115Q30KQ5 88 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 MPP5Q8N3R9 675 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 BHMTQ93088 406 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 MCUR1Q96AQ8 359 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 PLCD4Q9BRC7 762 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 C20orf96Q9NUD7 363 aaPredicted RBP12.52□□□□□ -0.41
CLDN4-203ENST00000435050 FIS1Q9Y3D6 152 aa12.52□□□□□ -0.41
CLDN4-203ENST00000435050 STAU1O95793 577 aaKnown RBP12.51□□□□□ -0.41
CLDN4-203ENST00000435050 APOEP02649 317 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 SLC10A2Q12908 348 aaPredicted RBP12.51□□□□□ -0.41
CLDN4-203ENST00000435050 ITPRIPL1Q6GPH6 555 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 C16orf46Q6P387 395 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 SREK1Q8WXA9 508 aaKnown RBP12.51□□□□□ -0.41
CLDN4-203ENST00000435050 OSBPL7Q9BZF2 842 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 PPARGC1AQ9UBK2 798 aaKnown RBP12.51□□□□□ -0.41
CLDN4-203ENST00000435050 SPAG6O75602 509 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 F9P00740 461 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 FDFT1P37268 417 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 ZCCHC23Q6ZST2 131 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 GIPC2Q8TF65 315 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 CENPTQ96BT3 561 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 COLEC11Q9BWP8 271 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 CNGB3Q9NQW8 809 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 MPP6Q9NZW5 540 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 VANGL2Q9ULK5 521 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 COMMD10Q9Y6G5 202 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 ZWINTO95229 277 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 POLBP06746 335 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 GRK4P32298 578 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 ARFIP2P53365 341 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 NOGQ13253 232 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 MAPRE1Q15691 268 aaKnown RBP12.51□□□□□ -0.41
CLDN4-203ENST00000435050 CHI3L2Q15782 390 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 DCP1BQ8IZD4 617 aaKnown RBP12.51□□□□□ -0.41
CLDN4-203ENST00000435050 GSDMBQ8TAX9 411 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 CXorf38Q8TB03 319 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 FBXO32Q969P5 355 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 CAPNS2Q96L46 248 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 PPP1R36Q96LQ0 422 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 HMX1Q9NP08 348 aaPredicted RBP12.51□□□□□ -0.41
CLDN4-203ENST00000435050 CHST12Q9NRB3 414 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 ZFP69BQ9UJL9 534 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 ARL1P40616 181 aaPredicted RBP12.51□□□□□ -0.41
CLDN4-203ENST00000435050 WDR4P57081 412 aaKnown RBP12.51□□□□□ -0.41
CLDN4-203ENST00000435050 GJA9P57773 515 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 THOC5Q13769 683 aaKnown RBP12.51□□□□□ -0.41
CLDN4-203ENST00000435050 DPYSL2Q16555 572 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 RNF135Q8IUD6 432 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 GPATCH11Q8N954 259 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 SP110Q9HB58 689 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 TLK1Q9UKI8 766 aa12.51□□□□□ -0.41
CLDN4-203ENST00000435050 RLFQ13129 1914 aa12.5□□□□□ -0.41
CLDN4-203ENST00000435050 ITGB1P05556 798 aa12.5□□□□□ -0.41
CLDN4-203ENST00000435050 TARSP26639 723 aaKnown RBP12.5□□□□□ -0.41
CLDN4-203ENST00000435050 RPL9P32969 192 aaKnown RBP12.5□□□□□ -0.41
CLDN4-203ENST00000435050 PTPN7P35236 360 aa12.5□□□□□ -0.41
CLDN4-203ENST00000435050 TUBP50607 506 aa12.5□□□□□ -0.41
CLDN4-203ENST00000435050 COG7P83436 770 aa12.5□□□□□ -0.41
CLDN4-203ENST00000435050 POU6F1Q14863 301 aa12.5□□□□□ -0.41
CLDN4-203ENST00000435050 NCBP2-AS2Q69YL0 99 aa12.5□□□□□ -0.41
CLDN4-203ENST00000435050 UNC5AQ6ZN44 842 aa12.5□□□□□ -0.41
CLDN4-203ENST00000435050 PPP4R1Q8TF05 950 aa12.5□□□□□ -0.41
CLDN4-203ENST00000435050 KCNN1Q92952 543 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms