RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TMX2-CTNND1H3BSU7 103 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 PPEF1O14829 653 aaPredicted RBP11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 GSRP00390 522 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 CD97P48960 835 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 BCAR1P56945 870 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 PDAP1Q13442 181 aaKnown RBP11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 PPP1R2P3Q6NXS1 205 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 UBR7Q8N806 425 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 ADCY4Q8NFM4 1077 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 MAPK15Q8TD08 544 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 ATP6V1E2Q96A05 226 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 PPWD1Q96BP3 646 aaKnown RBP11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 RTKNQ9BST9 563 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 MTMR12Q9C0I1 747 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 COQ10BQ9H8M1 238 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 RSAD1Q9HA92 442 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 PNPLA8Q9NP80 782 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 C20orf96Q9NUD7 363 aaPredicted RBP11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 FBXO40Q9UH90 709 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 AFG3L2Q9Y4W6 797 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 TCP10L2B9ZVM9 353 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 K7ERI5 159 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 ALDOAP04075 364 aaKnown RBP11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 ABCG1P45844 678 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 RAP1GAPP47736 663 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 NDST2P52849 883 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 CDK18Q07002 472 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 TRPC3Q13507 836 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 APOFQ13790 326 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 C15orf59Q2T9L4 293 aaPredicted RBP11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 CMC1Q7Z7K0 106 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 SLC4A5Q9BY07 1137 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 HAPLN2Q9GZV7 340 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 TCF7L2Q9NQB0 619 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 DNAJC28Q9NX36 388 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 RIMS3Q9UJD0 308 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 EFR3BQ9Y2G0 817 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 SNX13Q9Y5W8 968 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 SH3PXD2BA1X283 911 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 GLRA3O75311 464 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 RNASEH2AO75792 299 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 HMGCRP04035 888 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 KRT19P08727 400 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 PIK3R1P27986 724 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 MAPK10P53779 464 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 TFAMQ00059 246 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 NOMO1Q15155 1222 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 C16orf89Q6UX73 402 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 PDCD6IPQ8WUM4 868 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 PPP1R14BQ96C90 147 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 CPXM1Q96SM3 734 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 FRMD8P1Q9BZ68 369 aaPredicted RBP11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 OSBPL6Q9BZF3 934 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 C7orf72A4D263 438 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 METTL18O95568 372 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 ITGBL1O95965 494 aaPredicted RBP11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 CPA3P15088 417 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 SAT1P21673 171 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 ETFBP38117 255 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 SERPINB9P50453 376 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 CDK9P50750 372 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 OSTNP61366 133 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 CEACAM7Q14002 265 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 FAM102AQ5T9C2 384 aaPredicted RBP11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 IL23RQ5VWK5 629 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 TMEM198Q66K66 360 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 SAMD3Q8N6K7 520 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 KBTBD7Q8WVZ9 684 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 ABHD8Q96I13 439 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 KLHL32Q96NJ5 620 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 EBNA1BP2Q99848 306 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 XPNPEP3Q9NQH7 507 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 ANKEF1Q9NU02 776 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 CYTH4Q9UIA0 394 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 RNF11Q9Y3C5 154 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 SBF2Q86WG5 1849 aa11.86□□□□□ -0.51
HMGCS1-202ENST00000433297 GIPC1O14908 333 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 TRUB2O95900 331 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 ACAT1P24752 427 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 TNFSF9P41273 254 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 CDH8P55286 799 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 SLC10A2Q12908 348 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 OGFOD2Q6N063 350 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 C16orf87Q6PH81 154 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 CROCCP3Q8IVE0 287 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 DEPTORQ8TB45 409 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 MASTLQ96GX5 879 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 PGLYRP2Q96PD5 576 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 PEBP4Q96S96 227 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 GCOM2Q9BZD3 368 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 GLIS2Q9BZE0 524 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 STN1Q9H668 368 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 CYP26B1Q9NR63 512 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 TBC1D23Q9NUY8 699 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 COPG2Q9UBF2 871 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 MYRFQ9Y2G1 1151 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 PSAT1Q9Y617 370 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 OCM2P0CE71 109 aa11.85□□□□□ -0.51
HMGCS1-202ENST00000433297 OCMP0CE72 109 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms