RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SLCO1B1Q9Y6L6 691 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 CFAP47Q6ZTR5 3102 aa17.81■□□□□ 0.44
CPSF4-203ENST00000430038 BECN2A8MW95 431 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 AFPP02771 609 aaKnown RBP17.8■□□□□ 0.44
CPSF4-203ENST00000430038 SLC9A1P19634 815 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 CSRP1P21291 193 aaKnown RBP17.8■□□□□ 0.44
CPSF4-203ENST00000430038 PPP1R2P41236 205 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 TPMTP51580 245 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 FAM193AP78312 1265 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 PITX1P78337 314 aaPredicted RBP17.8■□□□□ 0.44
CPSF4-203ENST00000430038 PIK3R6Q5UE93 754 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 PIP4P1Q86T03 277 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 ADAM32Q8TC27 787 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 IRGQQ8WZA9 623 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 FCRL2Q96LA5 508 aaPredicted RBP17.8■□□□□ 0.44
CPSF4-203ENST00000430038 HSFY1Q96LI6 401 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 PRICKLE1Q96MT3 831 aaPredicted RBP17.8■□□□□ 0.44
CPSF4-203ENST00000430038 CRACR2AQ9BSW2 395 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 TMEM245Q9H330 911 aa17.8■□□□□ 0.44
CPSF4-203ENST00000430038 UBE2TQ9NPD8 197 aaPredicted RBP17.8■□□□□ 0.44
CPSF4-203ENST00000430038 XPO7Q9UIA9 1087 aaKnown RBP17.8■□□□□ 0.44
CPSF4-203ENST00000430038 AJAP1Q9UKB5 411 aaPredicted RBP17.8■□□□□ 0.44
CPSF4-203ENST00000430038 BICDL2A1A5D9 508 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 EPHX1P07099 455 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 CD6P30203 668 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 ZNF252P-AS1Q0IIN9 211 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 LMAN2Q12907 356 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 SEMA3BQ13214 749 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 TAF5Q15542 800 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 CHST9Q7L1S5 443 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 WDTC1Q8N5D0 677 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.79■□□□□ 0.44
CPSF4-203ENST00000430038 DQX1Q8TE96 717 aaKnown RBP17.79■□□□□ 0.44
CPSF4-203ENST00000430038 MYO19Q96H55 970 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 SLC39A13Q96H72 371 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 GTPBP2Q9BX10 602 aaKnown RBP17.79■□□□□ 0.44
CPSF4-203ENST00000430038 GPR174Q9BXC1 333 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 SLC4A5Q9BY07 1137 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 INTS6Q9UL03 887 aaKnown RBP17.79■□□□□ 0.44
CPSF4-203ENST00000430038 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.79■□□□□ 0.44
CPSF4-203ENST00000430038 TMEM131Q92545 1883 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 CABIN1Q9Y6J0 2220 aa17.79■□□□□ 0.44
CPSF4-203ENST00000430038 PAPSS1O43252 624 aaPredicted RBP17.78■□□□□ 0.44
CPSF4-203ENST00000430038 ACSL4O60488 711 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 TBL1XO60907 577 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 GJB3O75712 270 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 LATS1O95835 1130 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 CEACAM1P13688 526 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 CD59P13987 128 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 HOXD12P35452 270 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 TBX4P57082 545 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 BNC1Q01954 994 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 CAMK2GQ13555 558 aaPredicted RBP17.78■□□□□ 0.44
CPSF4-203ENST00000430038 EIF4HQ15056 248 aaKnown RBP17.78■□□□□ 0.44
CPSF4-203ENST00000430038 FSCBQ5H9T9 825 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 MMS22LQ6ZRQ5 1243 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 UCMAQ8WVF2 138 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 ZNF606Q8WXB4 792 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 SIPA1Q96FS4 1042 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 KIAA1468Q9P260 1216 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 GGA2Q9UJY4 613 aa17.78■□□□□ 0.44
CPSF4-203ENST00000430038 IGF2RP11717 2491 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 DOCK9Q9BZ29 2069 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 SPAARA0A1B0GVQ0 90 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 ARHGAP33O14559 1287 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 NPC1O15118 1278 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 NDUFS2O75306 463 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 LETM1O95202 739 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-203ENST00000430038 IGLV3-19P01714 112 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 C7P10643 843 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 PABPC1P11940 636 aaKnown RBP17.77■□□□□ 0.44
CPSF4-203ENST00000430038 KRT5P13647 590 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 RPS24P62847 133 aaKnown RBP17.77■□□□□ 0.44
CPSF4-203ENST00000430038 RING1Q06587 406 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 FOXC1Q12948 553 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 STARD3Q14849 445 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 STILQ15468 1287 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 MBLAC2Q68D91 279 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 SERPINA13PQ6UXR4 307 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 RGL4Q8IZJ4 473 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 MINDY1Q8N5J2 469 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 C1orf216Q8TAB5 229 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 CEP76Q8TAP6 659 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 DNASE2BQ8WZ79 361 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 CAMK1GQ96NX5 476 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 TMEM121BQ9BXQ6 578 aaPredicted RBP17.77■□□□□ 0.44
CPSF4-203ENST00000430038 NUCKS1Q9H1E3 243 aaKnown RBP17.77■□□□□ 0.44
CPSF4-203ENST00000430038 STIM2Q9P246 746 aa17.77■□□□□ 0.44
CPSF4-203ENST00000430038 ZBTB24O43167 697 aaPredicted RBP17.76■□□□□ 0.43
CPSF4-203ENST00000430038 TIMM44O43615 452 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 SYNCRIPO60506 623 aaKnown RBP17.76■□□□□ 0.43
CPSF4-203ENST00000430038 FBXO21O94952 628 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 GNA14O95837 355 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 ACSL1P33121 698 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 GFPT1Q06210 699 aaPredicted RBP17.76■□□□□ 0.43
CPSF4-203ENST00000430038 CETN1Q12798 172 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 EIF4EBP2Q13542 120 aaPredicted RBP17.76■□□□□ 0.43
CPSF4-203ENST00000430038 ST3GAL2Q16842 350 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 DPY19L2P1Q6NXN4 242 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 TRIM65Q6PJ69 517 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms