RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 CYP3A43Q9HB55 503 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 TMX2Q9Y320 296 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 QRICH2Q9H0J4 1663 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 TMEM150BA6NC51 233 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 IGSF6O95976 241 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 OR56A5P0C7T3 313 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 ZCCHC18P0CG32 403 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 ADORA2AP29274 412 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 CD151P48509 253 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 XRCC4Q13426 336 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 GMCL1P1Q8NEA9 526 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 PIK3R5Q8WYR1 880 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 COMMD8Q9NX08 183 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 IL1RAPL1Q9NZN1 696 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 TECPR2O15040 1411 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 MED14O60244 1454 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 TMEM114B3SHH9 223 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 F8VZ95 297 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 KRT6AP02538 564 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 KRT6BP04259 564 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 SP100P23497 879 aaPredicted RBP15.75■□□□□ 0.11
PTPRF-206ENST00000429895 KRT6CP48668 564 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 BEX3Q00994 111 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 INTS5Q6P9B9 1019 aaKnown RBP15.75■□□□□ 0.11
PTPRF-206ENST00000429895 MARK2Q7KZI7 788 aaKnown RBP15.75■□□□□ 0.11
PTPRF-206ENST00000429895 SLC16A10Q8TF71 515 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 PRRG3Q9BZD7 231 aa15.75■□□□□ 0.11
PTPRF-206ENST00000429895 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.75■□□□□ 0.11
PTPRF-206ENST00000429895 MEI4A8MW99 385 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 RASA2Q15283 850 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 TBCELQ5QJ74 424 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 DNAJC14Q6Y2X3 702 aaPredicted RBP15.74■□□□□ 0.11
PTPRF-206ENST00000429895 DET1Q7L5Y6 550 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 KCNMB4Q86W47 210 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 SH3GL1Q99961 368 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 MID1IP1Q9NPA3 183 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 FAM153AQ9UHL3 310 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 POLG2Q9UHN1 485 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 MCM8Q9UJA3 840 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 RAB27AP51159 221 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 FBXO39Q8N4B4 442 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 TMC2Q8TDI7 906 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 VPS33AQ96AX1 596 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 GLIS2Q9BZE0 524 aaPredicted RBP15.74■□□□□ 0.11
PTPRF-206ENST00000429895 CAPN6Q9Y6Q1 641 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 XYLBO75191 536 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 USP17L7P0C7H9 530 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 CTSEP14091 401 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 SLC26A2P50443 739 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 PSMC6P62333 389 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 ZNF571Q7Z3V5 609 aaPredicted RBP15.74■□□□□ 0.11
PTPRF-206ENST00000429895 NOD2Q9HC29 1040 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 TAGLN3Q9UI15 199 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 AK9Q5TCS8 1911 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 LSM8O95777 96 aaKnown RBP15.74■□□□□ 0.11
PTPRF-206ENST00000429895 MPOP05164 745 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 CDH8P55286 799 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 IRX1P78414 480 aaPredicted RBP15.74■□□□□ 0.11
PTPRF-206ENST00000429895 MGAT5Q09328 741 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 SETMARQ53H47 684 aaPredicted RBP15.74■□□□□ 0.11
PTPRF-206ENST00000429895 N4BP2L1Q5TBK1 243 aaPredicted RBP15.74■□□□□ 0.11
PTPRF-206ENST00000429895 SLC30A9Q6PML9 568 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 C19orf18Q8NEA5 215 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 RNASE11Q8TAA1 199 aaKnown RBP15.74■□□□□ 0.11
PTPRF-206ENST00000429895 RSPH1Q8WYR4 309 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 TBL1YQ9BQ87 522 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 PDCD2LQ9BRP1 358 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 BCL2L14Q9BZR8 327 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 SERHL2Q9H4I8 314 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 SERHLQ9NQF3 203 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 LACTBL1A8MY62 500 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 TRIM13O60858 407 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 POLR2EP19388 210 aaKnown RBP15.74■□□□□ 0.11
PTPRF-206ENST00000429895 BDNFP23560 247 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 BCL2L1Q07817 233 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 OASLQ15646 514 aaKnown RBP15.74■□□□□ 0.11
PTPRF-206ENST00000429895 C4orf19Q8IY42 314 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 RTFDC1Q9BY42 306 aaPredicted RBP15.74■□□□□ 0.11
PTPRF-206ENST00000429895 SLC9A8Q9Y2E8 581 aa15.74■□□□□ 0.11
PTPRF-206ENST00000429895 AKAP3O75969 853 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 CYP2A6P11509 494 aaPredicted RBP15.73■□□□□ 0.11
PTPRF-206ENST00000429895 PSMB9P28065 219 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 SLC1A6P48664 564 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 RALGDSQ12967 914 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 GRIN3AQ8TCU5 1115 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 A0A0A6YYK5 440 aaPredicted RBP15.73■□□□□ 0.11
PTPRF-206ENST00000429895 ZNF7P17097 686 aaPredicted RBP15.73■□□□□ 0.11
PTPRF-206ENST00000429895 RFX5P48382 616 aaPredicted RBP15.73■□□□□ 0.11
PTPRF-206ENST00000429895 MARSP56192 900 aaKnown RBP15.73■□□□□ 0.11
PTPRF-206ENST00000429895 CXCL9Q07325 125 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 ARMCX4Q5H9R4 360 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 SCARA3Q6AZY7 606 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 ZNF112Q9UJU3 913 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 CROCC2H7BZ55 1655 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 PEX1O43933 1283 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 TAF13Q15543 124 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 SV2AQ7L0J3 742 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 SLC2A14Q8TDB8 520 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 CLIP3Q96DZ5 547 aa15.73■□□□□ 0.11
PTPRF-206ENST00000429895 CD248Q9HCU0 757 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms