RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 STON2Q8WXE9 905 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 SKA1Q96BD8 255 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 POMKQ9H5K3 350 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 SLC2A4RGQ9NR83 387 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 AFF4Q9UHB7 1163 aaKnown RBP9.92□□□□□ -0.82
NEDD1-203ENST00000429527 PCDHGC3Q9UN70 934 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 R3HDM2Q9Y2K5 976 aaKnown RBP9.92□□□□□ -0.82
NEDD1-203ENST00000429527 F8W810 466 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 HNRNPDLO14979 420 aaKnown RBP9.92□□□□□ -0.82
NEDD1-203ENST00000429527 PER2O15055 1255 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 SPOPO43791 374 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 CXCL8P10145 99 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 DLATP10515 647 aaKnown RBP9.92□□□□□ -0.82
NEDD1-203ENST00000429527 MAGEA4P43358 317 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 GCLMP48507 274 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 AP3M2P53677 418 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 SKIDA1Q1XH10 827 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 DPH6Q7L8W6 267 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 OTOP3Q7RTS5 596 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 CDR2LQ86X02 465 aaPredicted RBP9.92□□□□□ -0.82
NEDD1-203ENST00000429527 CPNE8Q86YQ8 564 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 MICAL1Q8TDZ2 1067 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 SLITRK1Q96PX8 696 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 ZCWPW1Q9H0M4 648 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 IGFLR1Q9H665 355 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 ZMYM5Q9UJ78 669 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 VNN2O95498 520 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 FGF19O95750 216 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 PTPN4P29074 926 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 TNFSF9P41273 254 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 RASSF2P50749 326 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 ATP11AP98196 1134 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 SPARCL1Q14515 664 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 VARS2Q5ST30 1063 aaKnown RBP9.91□□□□□ -0.82
NEDD1-203ENST00000429527 NUGGCQ68CJ6 796 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 RSPO2Q6UXX9 243 aaPredicted RBP9.91□□□□□ -0.82
NEDD1-203ENST00000429527 TBC1D1Q86TI0 1168 aaPredicted RBP9.91□□□□□ -0.82
NEDD1-203ENST00000429527 ZNF461Q8TAF7 563 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 PRCCQ92733 491 aaPredicted RBP9.91□□□□□ -0.82
NEDD1-203ENST00000429527 TRPV5Q9NQA5 729 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 TUBGCP4Q9UGJ1 667 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 PRG3Q9Y2Y8 225 aaPredicted RBP9.91□□□□□ -0.82
NEDD1-203ENST00000429527 TMEM191CA6NGB0 347 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 CASTOR2A6NHX0 329 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 ZNF487B1APH4 448 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 CLGNO14967 610 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 AHCYL1O43865 530 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 TMEM191BP0C7N4 346 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 ETV4P43268 484 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 NEK3P51956 506 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 RAP1GDS1P52306 607 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 MRPS35P82673 323 aaKnown RBP9.91□□□□□ -0.82
NEDD1-203ENST00000429527 SIGLEC14Q08ET2 396 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 TMEM132DQ14C87 1099 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 SV2AQ7L0J3 742 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 ERICH1Q86X53 443 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 WDR49Q8IV35 697 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 TMEM86AQ8N2M4 240 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 GPD1LQ8N335 351 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 KREMEN2Q8NCW0 462 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 FAM13CQ8NE31 585 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 RTP4Q96DX8 246 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 PRRX2Q99811 253 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 APOL6Q9BWW8 343 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 DDX56Q9NY93 547 aaKnown RBP9.91□□□□□ -0.82
NEDD1-203ENST00000429527 NKIRAS1Q9NYS0 192 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 GM2AP17900 193 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 MMP8P22894 467 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 TKTP29401 623 aaKnown RBP9.91□□□□□ -0.82
NEDD1-203ENST00000429527 SATB1Q01826 763 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 FAM171A1Q5VUB5 890 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 JADE1Q6IE81 842 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 ZNF280DQ6N043 979 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 ADGRG6Q86SQ4 1221 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 TOP6BLQ8N6T0 577 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 BANPQ8N9N5 519 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 TDRD5Q8NAT2 981 aaKnown RBP9.91□□□□□ -0.82
NEDD1-203ENST00000429527 KHSRPQ92945 711 aaKnown RBP eCLIP9.91□□□□□ -0.822e-6■■■■□ 20
NEDD1-203ENST00000429527 C18orf25Q96B23 403 aaPredicted RBP9.91□□□□□ -0.82
NEDD1-203ENST00000429527 LRRC3Q9BY71 257 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 OSBPL8Q9BZF1 889 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 IP6K2Q9UHH9 426 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 PHTF1Q9UMS5 762 aa9.91□□□□□ -0.82
NEDD1-203ENST00000429527 COL4A3Q01955 1670 aa9.9□□□□□ -0.82
NEDD1-203ENST00000429527 SPTBN5Q9NRC6 3674 aaKnown RBP9.9□□□□□ -0.82
NEDD1-203ENST00000429527 TBXAS1P24557 533 aaPredicted RBP9.9□□□□□ -0.82
NEDD1-203ENST00000429527 CCNFP41002 786 aa9.9□□□□□ -0.82
NEDD1-203ENST00000429527 KCNJ1P48048 391 aa9.9□□□□□ -0.82
NEDD1-203ENST00000429527 CLNS1AP54105 237 aaKnown RBP9.9□□□□□ -0.82
NEDD1-203ENST00000429527 VCPP55072 806 aaKnown RBP9.9□□□□□ -0.82
NEDD1-203ENST00000429527 ZNF252P-AS1Q0IIN9 211 aa9.9□□□□□ -0.82
NEDD1-203ENST00000429527 GPR17Q13304 367 aa9.9□□□□□ -0.82
NEDD1-203ENST00000429527 KYNUQ16719 465 aa9.9□□□□□ -0.82
NEDD1-203ENST00000429527 FAM133BQ5BKY9 247 aaKnown RBP9.9□□□□□ -0.82
NEDD1-203ENST00000429527 ZBTB41Q5SVQ8 909 aa9.9□□□□□ -0.82
NEDD1-203ENST00000429527 IZUMO3Q5VZ72 239 aa9.9□□□□□ -0.82
NEDD1-203ENST00000429527 ZBTB33Q86T24 672 aa9.9□□□□□ -0.82
NEDD1-203ENST00000429527 ZNF516Q92618 1163 aa9.9□□□□□ -0.82
NEDD1-203ENST00000429527 ZNF560Q96MR9 790 aa9.9□□□□□ -0.82
NEDD1-203ENST00000429527 ACSS3Q9H6R3 686 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms