RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 METTL3Q86U44 580 aaKnown RBP15.12■□□□□ 0.01
SDC1-204ENST00000429035 ZC3H3Q8IXZ2 948 aaKnown RBP15.12■□□□□ 0.01
SDC1-204ENST00000429035 AHI1Q8N157 1196 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 SETD7Q8WTS6 366 aaKnown RBP15.12■□□□□ 0.01
SDC1-204ENST00000429035 CLEC4CQ8WTT0 213 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 KAT5Q92993 513 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 TMA16Q96EY4 203 aaKnown RBP15.12■□□□□ 0.01
SDC1-204ENST00000429035 NUP58Q9BVL2 599 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 ZDHHC5Q9C0B5 715 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 MIS12Q9H081 205 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 PLA2G4CQ9UP65 541 aa15.12■□□□□ 0.01
SDC1-204ENST00000429035 GOLGA6L7A0A1B0GV03 622 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 TYW5A2RUC4 315 aaKnown RBP15.11■□□□□ 0.01
SDC1-204ENST00000429035 H0Y626 953 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 BCAT2O15382 392 aaPredicted RBP15.11■□□□□ 0.01
SDC1-204ENST00000429035 TRIM16O95361 564 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 CER1O95813 267 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 FTH1P19P0C7X4 201 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 MATKP42679 507 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 HNRNPDQ14103 355 aaKnown RBP15.11■□□□□ 0.01
SDC1-204ENST00000429035 TRIP6Q15654 476 aaKnown RBP15.11■□□□□ 0.01
SDC1-204ENST00000429035 ZNF423Q2M1K9 1284 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 MBLAC2Q68D91 279 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 MFN1Q8IWA4 741 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 UBR7Q8N806 425 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 PNPLA1Q8N8W4 532 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 KDF1Q8NAX2 398 aaPredicted RBP15.11■□□□□ 0.01
SDC1-204ENST00000429035 RBBP8NLQ8NC74 664 aaPredicted RBP15.11■□□□□ 0.01
SDC1-204ENST00000429035 CADM4Q8NFZ8 388 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 WFDC5Q8TCV5 224 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 KCTD13Q8WZ19 329 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 DNASE2BQ8WZ79 361 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 TFAP2BQ92481 460 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 GAREM1Q9H706 876 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 IL21RQ9HBE5 538 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 METTL14Q9HCE5 456 aaKnown RBP15.11■□□□□ 0.01
SDC1-204ENST00000429035 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.11■□□□□ 0.01
SDC1-204ENST00000429035 CTNND2Q9UQB3 1225 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 MSRB2Q9Y3D2 182 aa15.11■□□□□ 0.01
SDC1-204ENST00000429035 PLXNA2O75051 1894 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 FAM208BQ5VWN6 2430 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 METTL12A8MUP2 240 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 TIMM44O43615 452 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 GJB3O75712 270 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 LATS1O95835 1130 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 MOCS2O96007 188 aaPredicted RBP15.1■□□□□ 0.01
SDC1-204ENST00000429035 LTFP02788 710 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 DNTTP04053 509 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 PAEPP09466 180 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 POLR2EP19388 210 aaKnown RBP15.1■□□□□ 0.01
SDC1-204ENST00000429035 SLC11A2P49281 568 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 TBX4P57082 545 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 CETN1Q12798 172 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 SLC14A1Q13336 389 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 TTC31Q49AM3 519 aaPredicted RBP15.1■□□□□ 0.01
SDC1-204ENST00000429035 COBLL1Q53SF7 1204 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 ADGRF1Q5T601 910 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 NUGGCQ68CJ6 796 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 PMF1Q6P1K2 205 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 LCLAT1Q6UWP7 414 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 RRAGAQ7L523 313 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 GANCQ8TET4 914 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 FAM149B1Q96BN6 582 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 C6orf106Q9H6K1 298 aaPredicted RBP15.1■□□□□ 0.01
SDC1-204ENST00000429035 ST7Q9NRC1 585 aa15.1■□□□□ 0.01
SDC1-204ENST00000429035 FNDC3AQ9Y2H6 1198 aaKnown RBP15.1■□□□□ 0.01
SDC1-204ENST00000429035 A0A1B0GVT2 93 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 GOLGA8CPA6NN73 597 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 FSBPO95073 299 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 ATP5BP06576 529 aaKnown RBP15.09■□□□□ 0.01
SDC1-204ENST00000429035 SLC6A4P31645 630 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 CD70P32970 193 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 ACSL1P33121 698 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 MCCD1P59942 119 aaPredicted RBP15.09■□□□□ 0.01
SDC1-204ENST00000429035 CAMK2GQ13555 558 aaPredicted RBP15.09■□□□□ 0.01
SDC1-204ENST00000429035 PKDCCQ504Y2 493 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 MSANTD2Q6P1R3 559 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 IL27RAQ6UWB1 636 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 LAYNQ6UX15 382 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 ADAT2Q7Z6V5 191 aaKnown RBP15.09■□□□□ 0.01
SDC1-204ENST00000429035 ARHGEF19Q8IW93 802 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 UNC45BQ8IWX7 931 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 CARNMT1Q8N4J0 409 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 CEP63Q96MT8 703 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 BTBD1Q9H0C5 482 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 TM7SF3Q9NS93 570 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 MAN1B1Q9UKM7 699 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 KIAA1257Q9ULG3 409 aa15.09■□□□□ 0.01
SDC1-204ENST00000429035 PTPRBP23467 1997 aa15.08■□□□□ 0
SDC1-204ENST00000429035 FAM47DPA6NHR8 397 aa15.08■□□□□ 0
SDC1-204ENST00000429035 SRRM3A6NNA2 597 aaPredicted RBP15.08■□□□□ 0
SDC1-204ENST00000429035 RNF225M0QZC1 329 aaPredicted RBP15.08■□□□□ 0
SDC1-204ENST00000429035 ACSL4O60488 711 aa15.08■□□□□ 0
SDC1-204ENST00000429035 SEMA4FO95754 770 aa15.08■□□□□ 0
SDC1-204ENST00000429035 IGLV3-19P01714 112 aa15.08■□□□□ 0
SDC1-204ENST00000429035 DLDP09622 509 aaKnown RBP15.08■□□□□ 0
SDC1-204ENST00000429035 KRT5P13647 590 aa15.08■□□□□ 0
SDC1-204ENST00000429035 CD44P16070 742 aaKnown RBP15.08■□□□□ 0
SDC1-204ENST00000429035 CSNK1EP49674 416 aaKnown RBP15.08■□□□□ 0
SDC1-204ENST00000429035 STX17P56962 302 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms