RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 GPR174Q9BXC1 333 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 ABCB8Q9NUT2 735 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 CTNND2Q9UQB3 1225 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 UPK3BL1B0FP48 263 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 UPK3BL2E5RIL1 263 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 IGLV3-19P01714 112 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 LTFP02788 710 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 EPHX1P07099 455 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 BNC1Q01954 994 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 STIM1Q13586 685 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 SERPINA13PQ6UXR4 307 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 CHST9Q7L1S5 443 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.17■□□□□ 0.18
SEC13-210ENST00000428626 EHBP1Q8NDI1 1231 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 DNASE2BQ8WZ79 361 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 TMA16Q96EY4 203 aaKnown RBP16.17■□□□□ 0.18
SEC13-210ENST00000428626 SIPA1Q96FS4 1042 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 LMLNQ96KR4 655 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 CAMK1GQ96NX5 476 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 SCNM1Q9BWG6 230 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 GTPBP4Q9BZE4 634 aaKnown RBP16.17■□□□□ 0.18
SEC13-210ENST00000428626 TMEM245Q9H330 911 aa16.17■□□□□ 0.18
SEC13-210ENST00000428626 DNAAF2Q9NVR5 837 aaKnown RBP16.17■□□□□ 0.18
SEC13-210ENST00000428626 HYAL3O43820 417 aaPredicted RBP16.16■□□□□ 0.18
SEC13-210ENST00000428626 SYNCRIPO60506 623 aaKnown RBP16.16■□□□□ 0.18
SEC13-210ENST00000428626 OPHN1O60890 802 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 LATS1O95835 1130 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 PROS1P07225 676 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 CD70P32970 193 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 GPD2P43304 727 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 ATXN3P54252 364 aaPredicted RBP16.16■□□□□ 0.18
SEC13-210ENST00000428626 KCNH2Q12809 1159 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 CAMK2GQ13555 558 aaPredicted RBP16.16■□□□□ 0.18
SEC13-210ENST00000428626 PLEKHG6Q3KR16 790 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 PIK3R6Q5UE93 754 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 UNQ6494/PRO21346Q6UXR6 183 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 ZCCHC9Q8N567 271 aaKnown RBP16.16■□□□□ 0.18
SEC13-210ENST00000428626 IRGQQ8WZA9 623 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 PRCCQ92733 491 aaPredicted RBP16.16■□□□□ 0.18
SEC13-210ENST00000428626 FOXJ1Q92949 421 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 PRICKLE1Q96MT3 831 aaPredicted RBP16.16■□□□□ 0.18
SEC13-210ENST00000428626 MIS12Q9H081 205 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 MTG2Q9H4K7 406 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 ACP6Q9NPH0 428 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 CYTH4Q9UIA0 394 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 HOOK1Q9UJC3 728 aaKnown RBP16.16■□□□□ 0.18
SEC13-210ENST00000428626 GGA2Q9UJY4 613 aa16.16■□□□□ 0.18
SEC13-210ENST00000428626 CABIN1Q9Y6J0 2220 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 METTL12A8MUP2 240 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 P4HA2O15460 535 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 TIMM44O43615 452 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 C7P10643 843 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 PABPC1P11940 636 aaKnown RBP16.15■□□□□ 0.18
SEC13-210ENST00000428626 RPL34P49207 117 aaKnown RBP16.15■□□□□ 0.18
SEC13-210ENST00000428626 MARSP56192 900 aaKnown RBP16.15■□□□□ 0.18
SEC13-210ENST00000428626 SIM1P81133 766 aaPredicted RBP16.15■□□□□ 0.18
SEC13-210ENST00000428626 GCNT1Q02742 428 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 GRIK2Q13002 908 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 BECN1Q14457 450 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 DCAF12L1Q5VU92 463 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 MBLAC2Q68D91 279 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 DENND1BQ6P3S1 775 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 FOXR2Q6PJQ5 311 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 RABEPKQ7Z6M1 372 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 FAM124AQ86V42 546 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 SCUBE3Q8IX30 993 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 HDDC3Q8N4P3 179 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 OR2T3Q8NH03 318 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 C1orf216Q8TAB5 229 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 DQX1Q8TE96 717 aaKnown RBP16.15■□□□□ 0.18
SEC13-210ENST00000428626 GATA6Q92908 595 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 MYO19Q96H55 970 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 FCRL2Q96LA5 508 aaPredicted RBP16.15■□□□□ 0.18
SEC13-210ENST00000428626 HSFY1Q96LI6 401 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 MED15Q96RN5 788 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 ADAM33Q9BZ11 813 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 INTS2Q9H0H0 1204 aaKnown RBP16.15■□□□□ 0.18
SEC13-210ENST00000428626 SLC32A1Q9H598 525 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 IL21RQ9HBE5 538 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 XPO7Q9UIA9 1087 aaKnown RBP16.15■□□□□ 0.18
SEC13-210ENST00000428626 INTS6Q9UL03 887 aaKnown RBP16.15■□□□□ 0.18
SEC13-210ENST00000428626 CNTN6Q9UQ52 1028 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 NAALADL1Q9UQQ1 740 aa16.15■□□□□ 0.18
SEC13-210ENST00000428626 MEI4A8MW99 385 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 SH3BP5O60239 455 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 ACSL4O60488 711 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 TBL1XO60907 577 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 ACSL1P33121 698 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 TBX4P57082 545 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 RPS24P62847 133 aaKnown RBP16.14■□□□□ 0.17
SEC13-210ENST00000428626 APBA1Q02410 837 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 FNDC3BQ53EP0 1204 aaKnown RBP16.14■□□□□ 0.17
SEC13-210ENST00000428626 WDR45BQ5MNZ6 344 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 SYCP2LQ5T4T6 812 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 SYPL2Q5VXT5 272 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 GJB7Q6PEY0 223 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 CADM4Q8NFZ8 388 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 ADAM32Q8TC27 787 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 WFIKKN2Q8TEU8 576 aa16.14■□□□□ 0.17
SEC13-210ENST00000428626 SLC39A13Q96H72 371 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms