RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 EDEM2Q9BV94 578 aa16.03■□□□□ 0.16
TSPO-204ENST00000428336 IRX2Q9BZI1 471 aaPredicted RBP16.03■□□□□ 0.16
TSPO-204ENST00000428336 CIPCQ9C0C6 399 aa16.03■□□□□ 0.16
TSPO-204ENST00000428336 MKRN2Q9H000 416 aaKnown RBP16.03■□□□□ 0.16
TSPO-204ENST00000428336 NDST4Q9H3R1 872 aa16.03■□□□□ 0.16
TSPO-204ENST00000428336 ABCB8Q9NUT2 735 aa16.03■□□□□ 0.16
TSPO-204ENST00000428336 EVLQ9UI08 416 aaPredicted RBP16.03■□□□□ 0.16
TSPO-204ENST00000428336 DNAJC12Q9UKB3 198 aa16.03■□□□□ 0.16
TSPO-204ENST00000428336 PILRBQ9UKJ0 227 aa16.03■□□□□ 0.16
TSPO-204ENST00000428336 PCDHGC3Q9UN70 934 aa16.03■□□□□ 0.16
TSPO-204ENST00000428336 CYP8B1Q9UNU6 501 aa16.03■□□□□ 0.16
TSPO-204ENST00000428336 TLR6Q9Y2C9 796 aa16.03■□□□□ 0.16
TSPO-204ENST00000428336 SPTBN2O15020 2390 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 RALGAPA1Q6GYQ0 2036 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 FOXN3O00409 490 aaPredicted RBP16.02■□□□□ 0.16
TSPO-204ENST00000428336 AP5Z1O43299 807 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 ITPKAP23677 461 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 KCNMA1Q12791 1236 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 STARD3Q14849 445 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 E2F5Q15329 346 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 HSP90AA4PQ58FG1 418 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 PEAR1Q5VY43 1037 aaPredicted RBP16.02■□□□□ 0.16
TSPO-204ENST00000428336 KIAA1324Q6UXG2 1013 aaKnown RBP16.02■□□□□ 0.16
TSPO-204ENST00000428336 CHST9Q7L1S5 443 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 METTL3Q86U44 580 aaKnown RBP16.02■□□□□ 0.16
TSPO-204ENST00000428336 WFIKKN2Q8TEU8 576 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 DDX1Q92499 740 aaKnown RBP16.02■□□□□ 0.16
TSPO-204ENST00000428336 LMLNQ96KR4 655 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 PRICKLE1Q96MT3 831 aaPredicted RBP16.02■□□□□ 0.16
TSPO-204ENST00000428336 CPXM1Q96SM3 734 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 LSM14BQ9BX40 385 aaKnown RBP16.02■□□□□ 0.16
TSPO-204ENST00000428336 LHX5Q9H2C1 402 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 POPDC2Q9HBU9 364 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 SAMSN1Q9NSI8 373 aaKnown RBP16.02■□□□□ 0.16
TSPO-204ENST00000428336 DACH1Q9UI36 760 aa16.02■□□□□ 0.16
TSPO-204ENST00000428336 CDX4O14627 284 aaPredicted RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 CAPN9O14815 690 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 IRAK2O43187 625 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 SYNCRIPO60506 623 aaKnown RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 TBL1XO60907 577 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 IGLV3-25P01717 112 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 PABPC1P11940 636 aaKnown RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 PRKCSHP14314 528 aaPredicted RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 CLCN1P35523 988 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 YWHAZP63104 245 aaKnown RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 PITX1P78337 314 aaPredicted RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 PTK2Q05397 1052 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 ZNF33AQ06730 810 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 EIF4EBP2Q13542 120 aaPredicted RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 TAF5Q15542 800 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 PTPRNQ16849 979 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 CT47A1Q5JQC4 288 aaPredicted RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 SLC47A2Q86VL8 602 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 PASD1Q8IV76 773 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 SLC41A1Q8IVJ1 513 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 FAM71AQ8IYT1 594 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 CYB5D2Q8WUJ1 264 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 DDX50Q9BQ39 737 aaKnown RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 TRIM62Q9BVG3 475 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 NUCKS1Q9H1E3 243 aaKnown RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 TMEM245Q9H330 911 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 USP36Q9P275 1121 aaKnown RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 XPO7Q9UIA9 1087 aaKnown RBP16.01■□□□□ 0.15
TSPO-204ENST00000428336 GGA2Q9UJY4 613 aa16.01■□□□□ 0.15
TSPO-204ENST00000428336 ATXN2Q99700 1313 aaKnown RBP16■□□□□ 0.15
TSPO-204ENST00000428336 C4orf47A7E2U8 309 aa16■□□□□ 0.15
TSPO-204ENST00000428336 KCNJ18B7U540 433 aa16■□□□□ 0.15
TSPO-204ENST00000428336 TRUB2O95900 331 aaKnown RBP16■□□□□ 0.15
TSPO-204ENST00000428336 PNMA6AP0CW24 399 aaPredicted RBP16■□□□□ 0.15
TSPO-204ENST00000428336 HLA-EP13747 358 aa16■□□□□ 0.15
TSPO-204ENST00000428336 CD70P32970 193 aa16■□□□□ 0.15
TSPO-204ENST00000428336 COPAP53621 1224 aa16■□□□□ 0.15
TSPO-204ENST00000428336 RPS24P62847 133 aaKnown RBP16■□□□□ 0.15
TSPO-204ENST00000428336 KCNJ12Q14500 433 aa16■□□□□ 0.15
TSPO-204ENST00000428336 ZC3H12AQ5D1E8 599 aaKnown RBP16■□□□□ 0.15
TSPO-204ENST00000428336 TRIM61Q5EBN2 209 aa16■□□□□ 0.15
TSPO-204ENST00000428336 MS4A13Q5J8X5 152 aa16■□□□□ 0.15
TSPO-204ENST00000428336 MBLAC2Q68D91 279 aa16■□□□□ 0.15
TSPO-204ENST00000428336 SERPINA13PQ6UXR4 307 aa16■□□□□ 0.15
TSPO-204ENST00000428336 TMPRSS6Q8IU80 811 aa16■□□□□ 0.15
TSPO-204ENST00000428336 AHI1Q8N157 1196 aa16■□□□□ 0.15
TSPO-204ENST00000428336 ZNF419Q96HQ0 510 aaPredicted RBP16■□□□□ 0.15
TSPO-204ENST00000428336 PPP1R13BQ96KQ4 1090 aa16■□□□□ 0.15
TSPO-204ENST00000428336 PRDM16Q9HAZ2 1276 aa16■□□□□ 0.15
TSPO-204ENST00000428336 ITM2CQ9NQX7 267 aa16■□□□□ 0.15
TSPO-204ENST00000428336 TMEM63CQ9P1W3 806 aa16■□□□□ 0.15
TSPO-204ENST00000428336 STIM2Q9P246 746 aa16■□□□□ 0.15
TSPO-204ENST00000428336 THADAQ6YHU6 1953 aa16■□□□□ 0.15
TSPO-204ENST00000428336 MOCS2O96007 188 aaPredicted RBP15.99■□□□□ 0.15
TSPO-204ENST00000428336 EPHX1P07099 455 aa15.99■□□□□ 0.15
TSPO-204ENST00000428336 GLI1P08151 1106 aa15.99■□□□□ 0.15
TSPO-204ENST00000428336 ADRB1P08588 477 aa15.99■□□□□ 0.15
TSPO-204ENST00000428336 C7P10643 843 aa15.99■□□□□ 0.15
TSPO-204ENST00000428336 HOXD12P35452 270 aa15.99■□□□□ 0.15
TSPO-204ENST00000428336 DPP6P42658 865 aa15.99■□□□□ 0.15
TSPO-204ENST00000428336 ARID5AQ03989 594 aa15.99■□□□□ 0.15
TSPO-204ENST00000428336 CAMK2GQ13555 558 aaPredicted RBP15.99■□□□□ 0.15
TSPO-204ENST00000428336 DCAF6Q58WW2 860 aa15.99■□□□□ 0.15
TSPO-204ENST00000428336 SLC23A3Q6PIS1 610 aa15.99■□□□□ 0.15
TSPO-204ENST00000428336 MFN1Q8IWA4 741 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms