RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 DCLK1O15075 740 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 PQBP1O60828 265 aaKnown RBP10.73□□□□□ -0.69
HDAC9-210ENST00000428307 PBX3P40426 434 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 CXCR3P49682 368 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 ATN1P54259 1190 aaPredicted RBP10.73□□□□□ -0.69
HDAC9-210ENST00000428307 ARPP19P56211 112 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 PDK1Q15118 436 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 KBTBD12Q3ZCT8 623 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 FAM171A1Q5VUB5 890 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 PRPF39Q86UA1 669 aaKnown RBP10.73□□□□□ -0.69
HDAC9-210ENST00000428307 MPP5Q8N3R9 675 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 PDCD7Q8N8D1 485 aaKnown RBP10.73□□□□□ -0.69
HDAC9-210ENST00000428307 GPR152Q8TDT2 470 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 DEPDC1BQ8WUY9 529 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 IRGQQ8WZA9 623 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 SPATA13Q96N96 652 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 FTHL17Q9BXU8 183 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.73□□□□□ -0.69
HDAC9-210ENST00000428307 TMEM161AQ9NX61 479 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 NKIRAS1Q9NYS0 192 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 KANSL3Q9P2N6 904 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 ZC3H7BQ9UGR2 993 aaKnown RBP10.73□□□□□ -0.69
HDAC9-210ENST00000428307 PHF24Q9UPV7 400 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 PCDHB7Q9Y5E2 793 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 FAM169AQ9Y6X4 670 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 HACD1B0YJ81 288 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 TCP11X1B4DZS4 312 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 GOLGA8RI6L899 631 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 MSI1O43347 362 aaKnown RBP10.73□□□□□ -0.69
HDAC9-210ENST00000428307 LRIG2O94898 1065 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 OAZ2O95190 189 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 KRT4P19013 534 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 PAX3P23760 479 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 STX2P32856 288 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 GPR15P49685 360 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 SCAPQ12770 1279 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 IFT88Q13099 833 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 SEMA3BQ13214 749 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 PAFAH1B3Q15102 231 aaKnown RBP10.73□□□□□ -0.69
HDAC9-210ENST00000428307 KLHL38Q2WGJ6 581 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 BTBD8Q5XKL5 378 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 PID1Q7Z2X4 250 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 SRLQ86TD4 932 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 CTAGE3PQ8IX95 158 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 FAM126BQ8IXS8 530 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 NPWQ8N729 165 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 ATAD1Q8NBU5 361 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 SEC16BQ96JE7 1060 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 DEFB118Q96PH6 123 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 SMC6Q96SB8 1091 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 CYTH2Q99418 400 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 KLF6Q99612 283 aaPredicted RBP10.73□□□□□ -0.69
HDAC9-210ENST00000428307 GPR62Q9BZJ7 368 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 RRN3Q9NYV6 651 aa10.73□□□□□ -0.69
HDAC9-210ENST00000428307 LAMA2P24043 3122 aaKnown RBP10.72□□□□□ -0.69
HDAC9-210ENST00000428307 FAM47DPA6NHR8 397 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 TNFRSF10BO14763 440 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 PPP1R12AO14974 1030 aaPredicted RBP10.72□□□□□ -0.69
HDAC9-210ENST00000428307 STK10O94804 968 aaKnown RBP10.72□□□□□ -0.69
HDAC9-210ENST00000428307 CDK7P50613 346 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 AIF1P55008 147 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 CRADDP78560 199 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 WASHC5Q12768 1159 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 PRKD1Q15139 912 aaPredicted RBP10.72□□□□□ -0.69
HDAC9-210ENST00000428307 MTFR1Q15390 333 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 VARS2Q5ST30 1063 aaKnown RBP10.72□□□□□ -0.69
HDAC9-210ENST00000428307 GKAP1Q5VSY0 366 aaPredicted RBP10.72□□□□□ -0.69
HDAC9-210ENST00000428307 RWDD4Q6NW29 188 aaKnown RBP10.72□□□□□ -0.69
HDAC9-210ENST00000428307 ADGRD1Q6QNK2 874 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 C4orf22Q6V702 233 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 ZNF534Q76KX8 674 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 TTC9BQ8N6N2 239 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 SCLYQ96I15 445 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 CELF6Q96J87 481 aaKnown RBP10.72□□□□□ -0.69
HDAC9-210ENST00000428307 NMUR1Q9HB89 426 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 PNPLA8Q9NP80 782 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 ACTL7BQ9Y614 415 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 SOAT2O75908 522 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 FAM155BO75949 473 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 CPP00450 1065 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 PSMB4P28070 264 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 RPA3P35244 121 aaPredicted RBP10.72□□□□□ -0.69
HDAC9-210ENST00000428307 MAGEA6P43360 314 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 GLUD2P49448 558 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 CCL23P55773 120 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 NR1H3Q13133 447 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 BFSP2Q13515 415 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 SEMA5AQ13591 1074 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 ARHGEF6Q15052 776 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 TCTN1Q2MV58 587 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 CTXN3Q4LDR2 81 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 SCD5Q86SK9 330 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 ZNF567Q8N184 647 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.72□□□□□ -0.69
HDAC9-210ENST00000428307 DCAKDQ8WVC6 231 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 CASP10Q92851 521 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 CABS1Q96KC9 395 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 AGAP3Q96P47 875 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 EPAS1Q99814 870 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 ELAC2Q9BQ52 826 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms