RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 ZBED1O96006 694 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 RPL13P26373 211 aaKnown RBP17.68■□□□□ 0.42
PSMD4-203ENST00000427779 CD27P26842 260 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 HLA-FP30511 346 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 TKTL1P51854 596 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 PPP3CAQ08209 521 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 SMAD1Q15797 465 aaKnown RBP17.68■□□□□ 0.42
PSMD4-203ENST00000427779 NFIL3Q16649 462 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 PTPRNQ16849 979 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 FOXD4L6Q3SYB3 417 aaPredicted RBP17.68■□□□□ 0.42
PSMD4-203ENST00000427779 FOXD4L5Q5VV16 416 aaPredicted RBP17.68■□□□□ 0.42
PSMD4-203ENST00000427779 ARHGAP17Q68EM7 881 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 KRT39Q6A163 491 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 FOXD4L3Q6VB84 417 aaPredicted RBP17.68■□□□□ 0.42
PSMD4-203ENST00000427779 CHST9Q7L1S5 443 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 FMNL3Q8IVF7 1028 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 FAM186BQ8IYM0 893 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 CYB5D2Q8WUJ1 264 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 FOXD4L4Q8WXT5 416 aaPredicted RBP17.68■□□□□ 0.42
PSMD4-203ENST00000427779 CCDC47Q96A33 483 aaKnown RBP17.68■□□□□ 0.42
PSMD4-203ENST00000427779 BIRC7Q96CA5 298 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 TMEM176AQ96HP8 235 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 MMRN2Q9H8L6 949 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 FTSJ1Q9UET6 329 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 USP25Q9UHP3 1055 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 CFAP45Q9UL16 551 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 SLCO1B1Q9Y6L6 691 aa17.68■□□□□ 0.42
PSMD4-203ENST00000427779 A0A087WV48 116 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 TSPAN3O60637 253 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 LATS1O95835 1130 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 ATP5BP06576 529 aaKnown RBP17.67■□□□□ 0.42
PSMD4-203ENST00000427779 PSMC2P35998 433 aaKnown RBP17.67■□□□□ 0.42
PSMD4-203ENST00000427779 RPS14P62263 151 aaKnown RBP17.67■□□□□ 0.42
PSMD4-203ENST00000427779 CAMK2BQ13554 666 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 PM20D1Q6GTS8 502 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 ZNF366Q8N895 744 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.67■□□□□ 0.42
PSMD4-203ENST00000427779 ANKRD52Q8NB46 1076 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 SLC4A11Q8NBS3 891 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 RNF139Q8WU17 664 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 TMA16Q96EY4 203 aaKnown RBP17.67■□□□□ 0.42
PSMD4-203ENST00000427779 CISHQ9NSE2 258 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 ABCB8Q9NUT2 735 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 SUN2Q9UH99 717 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 GGA2Q9UJY4 613 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 STOML2Q9UJZ1 356 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 COL5A1P20908 1838 aaPredicted RBP17.67■□□□□ 0.42
PSMD4-203ENST00000427779 ASXL3Q9C0F0 2248 aa17.67■□□□□ 0.42
PSMD4-203ENST00000427779 H0Y8X5 98 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 PAPSS1O43252 624 aaPredicted RBP17.66■□□□□ 0.42
PSMD4-203ENST00000427779 DLDP09622 509 aaKnown RBP17.66■□□□□ 0.42
PSMD4-203ENST00000427779 ZSCAN22P10073 491 aaPredicted RBP17.66■□□□□ 0.42
PSMD4-203ENST00000427779 PABPC1P11940 636 aaKnown RBP17.66■□□□□ 0.42
PSMD4-203ENST00000427779 GTF2H1P32780 548 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 CTSKP43235 329 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 C21orf59P57076 290 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 CCDC157Q569K6 752 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 ADGRF1Q5T601 910 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 ZNF776Q68DI1 518 aaPredicted RBP17.66■□□□□ 0.42
PSMD4-203ENST00000427779 ZNF557Q8N988 423 aaPredicted RBP17.66■□□□□ 0.42
PSMD4-203ENST00000427779 SKA1Q96BD8 255 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 IPO9Q96P70 1041 aaKnown RBP17.66■□□□□ 0.42
PSMD4-203ENST00000427779 BBC3Q96PG8 261 aaPredicted RBP17.66■□□□□ 0.42
PSMD4-203ENST00000427779 ACE2Q9BYF1 805 aaPredicted RBP17.66■□□□□ 0.42
PSMD4-203ENST00000427779 ULBP1Q9BZM6 244 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 LRRC4Q9HBW1 653 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 PRSS16Q9NQE7 514 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 SCML1Q9UN30 329 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 NCKAP1Q9Y2A7 1128 aa17.66■□□□□ 0.42
PSMD4-203ENST00000427779 PLXNA2O75051 1894 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 FAM149AA5PLN7 773 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 XPO1O14980 1071 aaKnown RBP17.65■□□□□ 0.42
PSMD4-203ENST00000427779 F13A1P00488 732 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 RAD23BP54727 409 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 RACK1P63244 317 aaKnown RBP17.65■□□□□ 0.42
PSMD4-203ENST00000427779 SFSWAPQ12872 951 aaKnown RBP17.65■□□□□ 0.42
PSMD4-203ENST00000427779 MBLAC2Q68D91 279 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 DHRS13Q6UX07 377 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 USP30Q70CQ3 517 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 KIAA0907Q7Z7F0 614 aaPredicted RBP17.65■□□□□ 0.42
PSMD4-203ENST00000427779 ADIPOR2Q86V24 386 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 TMPRSS12Q86WS5 348 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 MARCH9Q86YJ5 346 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 FBXL13Q8NEE6 735 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 IRX2Q9BZI1 471 aaPredicted RBP17.65■□□□□ 0.42
PSMD4-203ENST00000427779 HESX1Q9UBX0 185 aa17.65■□□□□ 0.42
PSMD4-203ENST00000427779 SHROOM3Q8TF72 1996 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 KCNK3O14649 394 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 STX10O60499 249 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 CDK4P11802 303 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 POLR2EP19388 210 aaKnown RBP17.64■□□□□ 0.41
PSMD4-203ENST00000427779 HNF1BP35680 557 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 ABCG1P45844 678 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 MXI1P50539 228 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 ADAM9Q13443 819 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 MPP7Q5T2T1 576 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 KIAA0895LQ68EN5 471 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 LAYNQ6UX15 382 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 SIX6OS1Q8N1H7 587 aa17.64■□□□□ 0.41
PSMD4-203ENST00000427779 NXPE2Q96DL1 559 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms