RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 C1QL1O75973 258 aa15.31■□□□□ 0.04
PDAP1-202ENST00000426447 ATP5BP06576 529 aaKnown RBP15.31■□□□□ 0.04
PDAP1-202ENST00000426447 C1SP09871 688 aa15.31■□□□□ 0.04
PDAP1-202ENST00000426447 HLA-FP30511 346 aa15.31■□□□□ 0.04
PDAP1-202ENST00000426447 CLDN6P56747 220 aa15.31■□□□□ 0.04
PDAP1-202ENST00000426447 SLC8A3P57103 927 aa15.31■□□□□ 0.04
PDAP1-202ENST00000426447 YWHAGP61981 247 aaKnown RBP eCLIP15.31■□□□□ 0.04
PDAP1-202ENST00000426447 TARDBPQ13148 414 aaKnown RBP eCLIP15.31■□□□□ 0.04
PDAP1-202ENST00000426447 DNAJC3Q13217 504 aa15.31■□□□□ 0.04
PDAP1-202ENST00000426447 ZNF394Q53GI3 561 aa15.31■□□□□ 0.04
PDAP1-202ENST00000426447 ZNF776Q68DI1 518 aaPredicted RBP15.31■□□□□ 0.04
PDAP1-202ENST00000426447 KIAA0895LQ68EN5 471 aa15.31■□□□□ 0.04
PDAP1-202ENST00000426447 CCDC150Q8NCX0 1101 aa15.31■□□□□ 0.04
PDAP1-202ENST00000426447 LSM14AQ8ND56 463 aaKnown RBP15.31■□□□□ 0.04
PDAP1-202ENST00000426447 ELF4Q99607 663 aaPredicted RBP15.31■□□□□ 0.04
PDAP1-202ENST00000426447 ABCB8Q9NUT2 735 aa15.31■□□□□ 0.04
PDAP1-202ENST00000426447 DMAC2Q9NW81 257 aa15.31■□□□□ 0.04
PDAP1-202ENST00000426447 CBX4O00257 560 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 PAPSS1O43252 624 aaPredicted RBP15.3■□□□□ 0.04
PDAP1-202ENST00000426447 TLX3O43711 291 aaPredicted RBP15.3■□□□□ 0.04
PDAP1-202ENST00000426447 HOXD9P28356 352 aaPredicted RBP15.3■□□□□ 0.04
PDAP1-202ENST00000426447 PDE4CQ08493 712 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 SFSWAPQ12872 951 aaKnown RBP15.3■□□□□ 0.04
PDAP1-202ENST00000426447 CUL4BQ13620 913 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 MBLAC2Q68D91 279 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 SHC4Q6S5L8 630 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 SLC9A9Q8IVB4 645 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 FAM217AQ8IXS0 508 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 AHI1Q8N157 1196 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 EID2Q8N6I1 236 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 RNF139Q8WU17 664 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 ZNF396Q96N95 335 aaPredicted RBP15.3■□□□□ 0.04
PDAP1-202ENST00000426447 AASDHPPTQ9NRN7 309 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 GGA2Q9UJY4 613 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 MTMR6Q9Y217 621 aa15.3■□□□□ 0.04
PDAP1-202ENST00000426447 ASXL3Q9C0F0 2248 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 A0A1W2PPC4 97 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 RNASEH1O60930 286 aaKnown RBP15.29■□□□□ 0.04
PDAP1-202ENST00000426447 NR3C1P04150 777 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 DLDP09622 509 aaKnown RBP15.29■□□□□ 0.04
PDAP1-202ENST00000426447 PABPC1P11940 636 aaKnown RBP15.29■□□□□ 0.04
PDAP1-202ENST00000426447 PLA2G2AP14555 144 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 POLR2EP19388 210 aaKnown RBP15.29■□□□□ 0.04
PDAP1-202ENST00000426447 VAMP7P51809 220 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 TKTL1P51854 596 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 ZNF445P59923 1031 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 TRIP4Q15650 581 aaPredicted RBP15.29■□□□□ 0.04
PDAP1-202ENST00000426447 HES3Q5TGS1 186 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 GPR155Q7Z3F1 870 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 ADIPOR2Q86V24 386 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 PIGZQ86VD9 579 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 FMNL3Q8IVF7 1028 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 SLC6A18Q96N87 628 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 BACH2Q9BYV9 841 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 UBXN6Q9BZV1 441 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 NRSN2Q9GZP1 204 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 NIF3L1Q9GZT8 377 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 APOBEC3GQ9HC16 384 aaKnown RBP15.29■□□□□ 0.04
PDAP1-202ENST00000426447 OLA1Q9NTK5 396 aaKnown RBP15.29■□□□□ 0.04
PDAP1-202ENST00000426447 FBXL12Q9NXK8 326 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 FAM13BQ9NYF5 915 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 MYH10P35580 1976 aa15.29■□□□□ 0.04
PDAP1-202ENST00000426447 GOLGA4Q13439 2230 aaKnown RBP15.28■□□□□ 0.04
PDAP1-202ENST00000426447 LRRC72A6NJI9 287 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 PDXKO00764 312 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 ZBED1O96006 694 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 IGHV4-34P06331 123 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 GCLMP48507 274 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 ARRB1P49407 418 aaPredicted RBP15.28■□□□□ 0.04
PDAP1-202ENST00000426447 ST8SIA6P61647 398 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 STK4Q13043 487 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 ADGRF1Q5T601 910 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 USP30Q70CQ3 517 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 TAS1R2Q8TE23 839 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 FGF11Q92914 225 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 OMDQ99983 421 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 ORAI3Q9BRQ5 295 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 MMRN2Q9H8L6 949 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 GDF3Q9NR23 364 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 EXOC1Q9NV70 894 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 SCML1Q9UN30 329 aa15.28■□□□□ 0.04
PDAP1-202ENST00000426447 HBS1LQ9Y450 684 aaKnown RBP15.28■□□□□ 0.04
PDAP1-202ENST00000426447 SETXQ7Z333 2677 aaKnown RBP15.27■□□□□ 0.04
PDAP1-202ENST00000426447 TEX51A0A1B0GUA7 166 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 YKT6O15498 198 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 SLFN14P0C7P3 912 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 C7P10643 843 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 PDIA4P13667 645 aaKnown RBP15.27■□□□□ 0.04
PDAP1-202ENST00000426447 CD38P28907 300 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 GALCP54803 685 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 RTP5Q14D33 572 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 NCEH1Q6PIU2 408 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 CEP57L1Q8IYX8 460 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 ZNF843Q8N446 348 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 SAP25Q8TEE9 199 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 TMEM174Q8WUU8 243 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 NDRG1Q92597 394 aaKnown RBP15.27■□□□□ 0.04
PDAP1-202ENST00000426447 TMEM176AQ96HP8 235 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 ULBP1Q9BZM6 244 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms