RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 SLITRK1Q96PX8 696 aa5.68□□□□□ -1.5
VPS8-205ENST00000424721 LSM14BQ9BX40 385 aaKnown RBP5.68□□□□□ -1.5
VPS8-205ENST00000424721 NUSAP1Q9BXS6 441 aaKnown RBP5.68□□□□□ -1.5
VPS8-205ENST00000424721 BRINP2Q9C0B6 783 aa5.68□□□□□ -1.5
VPS8-205ENST00000424721 CUEDC2Q9H467 287 aa5.68□□□□□ -1.5
VPS8-205ENST00000424721 SLC32A1Q9H598 525 aa5.68□□□□□ -1.5
VPS8-205ENST00000424721 OLFML3Q9NRN5 406 aa5.68□□□□□ -1.5
VPS8-205ENST00000424721 C1GALT1Q9NS00 363 aa5.68□□□□□ -1.5
VPS8-205ENST00000424721 BLOC1S4Q9NUP1 217 aa5.68□□□□□ -1.5
VPS8-205ENST00000424721 COMMD8Q9NX08 183 aa5.68□□□□□ -1.5
VPS8-205ENST00000424721 GTF3C4Q9UKN8 822 aa5.68□□□□□ -1.5
VPS8-205ENST00000424721 ATP8B3O60423 1300 aa5.68□□□□□ -1.5
VPS8-205ENST00000424721 MYH15Q9Y2K3 1946 aa5.68□□□□□ -1.5
VPS8-205ENST00000424721 BCLAF3A2AJT9 711 aaKnown RBP5.67□□□□□ -1.5
VPS8-205ENST00000424721 VPS37CA5D8V6 355 aaPredicted RBP5.67□□□□□ -1.5
VPS8-205ENST00000424721 GABRDO14764 452 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 PPEF2O14830 753 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 DNAJA2O60884 412 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 RTN3O95197 1032 aaPredicted RBP5.67□□□□□ -1.5
VPS8-205ENST00000424721 PRAMEF12O95522 483 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 EGFP01133 1207 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 TGFB1P01137 390 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 APODP05090 189 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 P4HA1P13674 534 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 CEACAM1P13688 526 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 ATF6P18850 670 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 TNNI1P19237 187 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 ATICP31939 592 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 MPLP40238 635 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 EIF2DP41214 584 aaKnown RBP5.67□□□□□ -1.5
VPS8-205ENST00000424721 ATXN3P54252 364 aaPredicted RBP5.67□□□□□ -1.5
VPS8-205ENST00000424721 TNNC1P63316 161 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 SHC2P98077 582 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 CREB5Q02930 508 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 GOLGA8FQ08AF8 430 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 GOLGA8DPQ0D2H9 430 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 HNRNPDQ14103 355 aaKnown RBP5.67□□□□□ -1.5
VPS8-205ENST00000424721 DMC1Q14565 340 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 PLK5Q496M5 336 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 N4BP2L1Q5TBK1 243 aaPredicted RBP5.67□□□□□ -1.5
VPS8-205ENST00000424721 FSTL4Q6MZW2 842 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 LETMD1Q6P1Q0 360 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 SLC39A4Q6P5W5 647 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 FAM171BQ6P995 826 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 CRELD2Q6UXH1 353 aaPredicted RBP5.67□□□□□ -1.5
VPS8-205ENST00000424721 SLC36A4Q6YBV0 504 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 Q6ZS52 159 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 DENND5BQ6ZUT9 1274 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 LPCAT2Q7L5N7 544 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 KBTBD6Q86V97 674 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 SFR1Q86XK3 245 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 BRSK2Q8IWQ3 736 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 ADGRF2Q8IZF7 708 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 ADGRG2Q8IZP9 1017 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 ARL14EPQ8N8R7 260 aaPredicted RBP5.67□□□□□ -1.5
VPS8-205ENST00000424721 IQUBQ8NA54 791 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 PDZD8Q8NEN9 1154 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 RPLP0P6Q8NHW5 317 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 CEP76Q8TAP6 659 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 GOLGA5Q8TBA6 731 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 MYCBPAPQ8TBZ2 947 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 SH3RF2Q8TEC5 729 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 OVCA2Q8WZ82 227 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 GATA6Q92908 595 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 EPSTI1Q96J88 318 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 C8orf48Q96LL4 319 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 ZNF396Q96N95 335 aaPredicted RBP5.67□□□□□ -1.5
VPS8-205ENST00000424721 PSMG3-AS1Q96PY0 264 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 CYP2S1Q96SQ9 504 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 PNKPQ96T60 521 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 KIF2CQ99661 725 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 STRA6Q9BX79 667 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 TMEM9BQ9NQ34 198 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 HPS4Q9NQG7 708 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 INTS13Q9NVM9 706 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 TBC1D7Q9P0N9 293 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 TPX2Q9ULW0 747 aaKnown RBP5.67□□□□□ -1.5
VPS8-205ENST00000424721 ARHGAP26Q9UNA1 814 aa5.67□□□□□ -1.5
VPS8-205ENST00000424721 F5P12259 2224 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 DOCK6Q96HP0 2047 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 NOTCH4Q99466 2003 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 E2F8A0AVK6 867 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 TBC1D3BA6NDS4 549 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 TMEM8BA6NDV4 472 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 UPK3BL1B0FP48 263 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 UPK3BL2E5RIL1 263 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 RGS13O14921 159 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 EIF3DO15371 548 aaKnown RBP eCLIP5.66□□□□□ -1.5
VPS8-205ENST00000424721 TACC1O75410 805 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 KCNK5O95279 499 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 PDGFRBP09619 1106 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 FAM87AP0C7U9 286 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 ARSAP15289 507 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 PTPN1P18031 435 aaKnown RBP5.66□□□□□ -1.5
VPS8-205ENST00000424721 CSRP1P21291 193 aaKnown RBP5.66□□□□□ -1.5
VPS8-205ENST00000424721 WARSP23381 471 aaKnown RBP5.66□□□□□ -1.5
VPS8-205ENST00000424721 BDNFP23560 247 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 YWHAQP27348 245 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 ADSSP30520 456 aa5.66□□□□□ -1.5
VPS8-205ENST00000424721 GRIA2P42262 883 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms