RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 GRXCR2A6NFK2 248 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 AMPD1P23109 780 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 KDELR1P24390 212 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 IL4RP24394 825 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 DPYSL3Q14195 570 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 ATAT1Q5SQI0 421 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 TRIM68Q6AZZ1 485 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 TFAP2DQ7Z6R9 452 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 PGAP3Q96FM1 320 aaPredicted RBP13.92□□□□□ -0.18
PRPF39-202ENST00000424478 HINFPQ9BQA5 517 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 LINC00597Q9H2U6 94 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 TASP1Q9H6P5 420 aa13.92□□□□□ -0.18
PRPF39-202ENST00000424478 OLA1Q9NTK5 396 aaKnown RBP13.92□□□□□ -0.18
PRPF39-202ENST00000424478 AGO1Q9UL18 857 aaKnown RBP13.92□□□□□ -0.18
PRPF39-202ENST00000424478 KCNU1A8MYU2 1149 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 PSTPIP1O43586 416 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 ZRANB2O95218 330 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRPF39-202ENST00000424478 FGGP02679 453 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 CTNNA2P26232 953 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 MS4A13Q5J8X5 152 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 EFHC2Q5JST6 749 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 PAPD7Q5XG87 772 aaKnown RBP13.91□□□□□ -0.18
PRPF39-202ENST00000424478 TPGS1Q6ZTW0 290 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 NDFIP2Q9NV92 336 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 WNT6Q9Y6F9 365 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 CNTN5O94779 1100 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 LRIG2O94898 1065 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 OLFM2O95897 454 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 DESP17661 470 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 ARHGAP15Q53QZ3 475 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 BEND5Q7L4P6 421 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 SMRP1Q8NCR6 262 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 ATG4AQ8WYN0 398 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 IGSF8Q969P0 613 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 TRIM62Q9BVG3 475 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 TDP1Q9NUW8 608 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 ARHGEF38Q9NXL2 777 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 MYO10Q9HD67 2058 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 F9P00740 461 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 APOEP02649 317 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 KRT7P08729 469 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 RPS24P62847 133 aaKnown RBP13.91□□□□□ -0.18
PRPF39-202ENST00000424478 ACAP1Q15027 740 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 SPOCD1Q6ZMY3 1216 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 CHSY1Q86X52 802 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 RSAD2Q8WXG1 361 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 KXD1Q9BQD3 176 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 UBE2ZQ9H832 354 aaPredicted RBP13.91□□□□□ -0.18
PRPF39-202ENST00000424478 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRPF39-202ENST00000424478 STIM2Q9P246 746 aa13.91□□□□□ -0.18
PRPF39-202ENST00000424478 R3HDM2Q9Y2K5 976 aaKnown RBP13.91□□□□□ -0.18
PRPF39-202ENST00000424478 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRPF39-202ENST00000424478 GREM1O60565 184 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 IGLV3-27P01718 113 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 POU3F3P20264 500 aaPredicted RBP13.9□□□□□ -0.18
PRPF39-202ENST00000424478 GRM2Q14416 872 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 FAM133BQ5BKY9 247 aaKnown RBP13.9□□□□□ -0.18
PRPF39-202ENST00000424478 CREG2Q8IUH2 290 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 KATNAL2Q8IYT4 538 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 CMASQ8NFW8 434 aaPredicted RBP13.9□□□□□ -0.18
PRPF39-202ENST00000424478 PCDH19Q8TAB3 1148 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 MIF4GDA9UHW6 222 aaKnown RBP13.9□□□□□ -0.18
PRPF39-202ENST00000424478 CDKN2BP42772 138 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 PPP3CCP48454 512 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 HARS2P49590 506 aaKnown RBP13.9□□□□□ -0.18
PRPF39-202ENST00000424478 TUBP50607 506 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 AUHQ13825 339 aaKnown RBP13.9□□□□□ -0.18
PRPF39-202ENST00000424478 ALFQ53S48 1182 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 TANGO2Q6ICL3 276 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 C1orf228Q6PIY5 440 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 RFX6Q8HWS3 928 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 FGF14Q92915 247 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 RRN3Q9NYV6 651 aa13.9□□□□□ -0.18
PRPF39-202ENST00000424478 HELZP42694 1942 aaKnown RBP13.89□□□□□ -0.19
PRPF39-202ENST00000424478 ZNF197O14709 1029 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 EPHB2P29323 1055 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 ARSEP51690 589 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 COG7P83436 770 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 BOLA3Q53S33 107 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 ARTNQ5T4W7 220 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 FBXL22Q6P050 247 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 LGI2Q8N0V4 545 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 ASIC4Q96FT7 647 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 CELF6Q96J87 481 aaKnown RBP13.89□□□□□ -0.19
PRPF39-202ENST00000424478 PRICKLE1Q96MT3 831 aaPredicted RBP13.89□□□□□ -0.19
PRPF39-202ENST00000424478 CSPG4P5Q96PW8 444 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 PLA2G2FQ9BZM2 168 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 SH3BP1Q9Y3L3 701 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 HOXB8P17481 243 aaPredicted RBP13.89□□□□□ -0.19
PRPF39-202ENST00000424478 SNX1Q13596 522 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 PPP2R5DQ14738 602 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 ARL13BQ3SXY8 428 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 PARM1Q6UWI2 310 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 POLNQ7Z5Q5 900 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 TADA2BQ86TJ2 420 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 C1orf54Q8WWF1 131 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 RPGRIP1Q96KN7 1286 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 OSBPL8Q9BZF1 889 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 CD207Q9UJ71 328 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 HEY1Q9Y5J3 304 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms