RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 HOXD9P28356 352 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-203ENST00000424393 GBP1P32455 592 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 KIR2DL1P43626 348 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-203ENST00000424393 CXCL12P48061 93 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 DGKGP49619 791 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 CCR3P51677 355 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 CSTF1Q05048 431 aaKnown RBP11.34□□□□□ -0.59
TOP3B-203ENST00000424393 C1QBPQ07021 282 aaKnown RBP11.34□□□□□ -0.59
TOP3B-203ENST00000424393 NME3Q13232 169 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 MPPE1Q53F39 396 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 C10orf76Q5T2E6 689 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 EMC10Q5UCC4 262 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 PIK3R6Q5UE93 754 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 RNF43Q68DV7 783 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 GRAMD4Q6IC98 578 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 ARCQ7LC44 396 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 BNIPLQ7Z465 357 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 DNAAF5Q86Y56 855 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 VSTM4Q8IW00 320 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 MCOLN2Q8IZK6 566 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 USP33Q8TEY7 942 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 SYN2Q92777 582 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-203ENST00000424393 TMA16Q96EY4 203 aaKnown RBP11.34□□□□□ -0.59
TOP3B-203ENST00000424393 PGAP3Q96FM1 320 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-203ENST00000424393 CFAP57Q96MR6 1250 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 PRICKLE1Q96MT3 831 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-203ENST00000424393 TBCBQ99426 244 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 NUCKS1Q9H1E3 243 aaKnown RBP11.34□□□□□ -0.59
TOP3B-203ENST00000424393 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.34□□□□□ -0.59
TOP3B-203ENST00000424393 RRN3Q9NYV6 651 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 HCN2Q9UL51 889 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 STAP1Q9ULZ2 295 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 LUC7L2Q9Y383 392 aaKnown RBP11.34□□□□□ -0.59
TOP3B-203ENST00000424393 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.34□□□□□ -0.592e-13■□□□□ 11.3
TOP3B-203ENST00000424393 FANCMQ8IYD8 2048 aa11.34□□□□□ -0.59
TOP3B-203ENST00000424393 TBC1D3BA6NDS4 549 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 TMCO5BA8MYB1 307 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 PRRT4C9JH25 899 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 I6L893 689 aaPredicted RBP11.33□□□□□ -0.6
TOP3B-203ENST00000424393 K7ESF4 209 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 TBL1XO60907 577 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 PAPSS2O95340 614 aaPredicted RBP11.33□□□□□ -0.6
TOP3B-203ENST00000424393 ADCY5O95622 1261 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 PLEKP08567 350 aaPredicted RBP11.33□□□□□ -0.6
TOP3B-203ENST00000424393 SLC2A3P11169 496 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 TACR2P21452 398 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 CCR1P32246 355 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 TNFRSF4P43489 277 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 CXCR3P49682 368 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 ATXN1P54253 815 aaKnown RBP11.33□□□□□ -0.6
TOP3B-203ENST00000424393 DEUP1Q05D60 604 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 PPP2R5DQ14738 602 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 SLC25A52Q3SY17 297 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 RAB6CQ53S08 254 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 C2orf27AQ580R0 203 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 TDRD12Q587J7 1177 aaKnown RBP11.33□□□□□ -0.6
TOP3B-203ENST00000424393 MS4A13Q5J8X5 152 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 RAP1GAP2Q684P5 730 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 SPECC1LQ69YQ0 1117 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 ZC3H14Q6PJT7 736 aaKnown RBP11.33□□□□□ -0.6
TOP3B-203ENST00000424393 SARM1Q6SZW1 724 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 CHSY1Q86X52 802 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 ATP6V0D2Q8N8Y2 350 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 C3orf20Q8ND61 904 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 WFDC5Q8TCV5 224 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 RXFP2Q8WXD0 754 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 NELL1Q92832 810 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 BTN2A3PQ96KV6 586 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 PRMT1Q99873 361 aaKnown RBP11.33□□□□□ -0.6
TOP3B-203ENST00000424393 IRX2Q9BZI1 471 aaPredicted RBP11.33□□□□□ -0.6
TOP3B-203ENST00000424393 RAB6CQ9H0N0 254 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 SEMA4AQ9H3S1 761 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 ZDHHC4Q9NPG8 344 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 ANLNQ9NQW6 1124 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 ARHGEF38Q9NXL2 777 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 SLC27A6Q9Y2P4 619 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 GVINP1Q7Z2Y8 2422 aa11.33□□□□□ -0.6
TOP3B-203ENST00000424393 MED19A0JLT2 244 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-203ENST00000424393 C2CD4BA6NLJ0 364 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 ATG13O75143 517 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 ENDOD1O94919 500 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 F9P00740 461 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 SERPING1P05155 500 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 KRT3P12035 628 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 GZMAP12544 262 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 PDGFRAP16234 1089 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 ABCB4P21439 1286 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 RRM1P23921 792 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 HNRNPH3P31942 346 aaKnown RBP11.32□□□□□ -0.6
TOP3B-203ENST00000424393 RFC1P35251 1148 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-203ENST00000424393 TIE1P35590 1138 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 RPS24P62847 133 aaKnown RBP11.32□□□□□ -0.6
TOP3B-203ENST00000424393 MRPS21P82921 87 aaKnown RBP11.32□□□□□ -0.6
TOP3B-203ENST00000424393 DMWDQ09019 674 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 PUM1Q14671 1186 aaKnown RBP eCLIP11.32□□□□□ -0.62e-7■□□□□ 8.7
TOP3B-203ENST00000424393 GEN1Q17RS7 908 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 C15orf59Q2T9L4 293 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-203ENST00000424393 ZNF528Q3MIS6 628 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 CCDC14Q49A88 953 aa11.32□□□□□ -0.6
TOP3B-203ENST00000424393 PREPLQ4J6C6 727 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms