RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 C17orf80Q9BSJ5 609 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 NDST4Q9H3R1 872 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.67□□□□□ -1.824e-8■■■■□ 26.1
TOP2A-201ENST00000423485 DNAJC12Q9UKB3 198 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 SLC38A8A6NNN8 435 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 C3orf80F5H4A9 247 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 RNF225M0QZC1 329 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PODXLO00592 558 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 MGEA5O60502 916 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ITGB6P18564 788 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 AMPD1P23109 780 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GRK2P25098 689 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CTSOP43234 321 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 RPS6P62753 249 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 RAPGEF1Q13905 1077 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 DMC1Q14565 340 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SLC27A1Q6PCB7 646 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 TAS2R42Q7RTR8 314 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 KIF18BQ86Y91 864 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CNPY4Q8N129 248 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ZCCHC9Q8N567 271 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SPPL2BQ8TCT7 592 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CA5BP1Q8WTZ4 195 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 BRF1Q92994 677 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GRAMD1AQ96CP6 724 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PAGE5Q96GU1 130 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SUCLG2Q96I99 432 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 TSPAN18Q96SJ8 248 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 NOC4LQ9BVI4 516 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 DRC3Q9H069 523 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 NCOA5Q9HCD5 579 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 METTL14Q9HCE5 456 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 KLHL11Q9NVR0 708 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CFAP97Q9P2B7 532 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GHRLQ9UBU3 117 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PADI3Q9ULW8 664 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GPR34Q9UPC5 381 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ASTN1O14525 1302 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 BCL9O00512 1426 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SH2B2O14492 632 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 BUB1O43683 1085 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CLASP2O75122 1294 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CCNDBP1O95273 360 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CRYABP02511 175 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CPA1P15085 419 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 EIF4BP23588 611 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 MLLT3P42568 568 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CDC16Q13042 620 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SNTA1Q13424 505 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 LY6KQ17RY6 165 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 MIIPQ5JXC2 388 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CELF3Q5SZQ8 465 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ZNF618Q5T7W0 954 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 IRGCQ6NXR0 463 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 DOK6Q6PKX4 331 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SLC9B2Q86UD5 537 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 STK32CQ86UX6 486 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 BBS7Q8IWZ6 715 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ZDHHC14Q8IZN3 488 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SCAIQ8N9R8 606 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 HJURPQ8NCD3 748 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 BSNDQ8WZ55 320 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 DLG3Q92796 817 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 HIST1H2AHQ96KK5 128 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 HIST1H2AJQ99878 128 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 UNC45AQ9H3U1 944 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ADAM28Q9UKQ2 775 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PCDHB14Q9Y5E9 798 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 COL1A2P08123 1366 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 LRRC37AA6NMS7 1700 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 MYO1GB0I1T2 1018 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 HNRNPRO43390 633 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SLC26A4O43511 780 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GLP2RO95838 553 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 HIST1H2AGP0C0S8 130 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 EPB42P16452 691 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 MX2P20592 715 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 HIST1H2ADP20671 130 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CDH3P22223 829 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CDC25BP30305 580 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ADD2P35612 726 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GRIA2P42262 883 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 RAB28P51157 221 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GPS2Q13227 327 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 KCNC3Q14003 757 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 HIST2H2ACQ16777 129 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SLC39A12Q504Y0 691 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 LACTB2Q53H82 288 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 MBLAC2Q68D91 279 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 HIST2H2AA3Q6FI13 130 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 BORAQ6PGQ7 559 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 STOX1Q6ZVD7 989 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 RAB44Q7Z6P3 723 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GPBP1Q86WP2 473 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 H2AFJQ9BTM1 129 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SPATA9Q9BWV2 254 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 OSBPL1AQ9BXW6 950 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PRKD2Q9BZL6 878 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms