RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 HSCBQ8IWL3 235 aa17.6■□□□□ 0.41
UPF3AP3-201ENST00000420996 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.6■□□□□ 0.41
UPF3AP3-201ENST00000420996 MDM1Q8TC05 714 aa17.6■□□□□ 0.41
UPF3AP3-201ENST00000420996 NDRG1Q92597 394 aaKnown RBP17.6■□□□□ 0.41
UPF3AP3-201ENST00000420996 TATDN2Q93075 761 aa17.6■□□□□ 0.41
UPF3AP3-201ENST00000420996 TMA16Q96EY4 203 aaKnown RBP17.6■□□□□ 0.41
UPF3AP3-201ENST00000420996 FBRSQ9HAH7 460 aa17.6■□□□□ 0.41
UPF3AP3-201ENST00000420996 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.6■□□□□ 0.41
UPF3AP3-201ENST00000420996 TULP2O00295 520 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 LATS1O95835 1130 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 BCAT1P54687 386 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 KIF19Q2TAC6 998 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 BSPRYQ5W0U4 402 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 CHST9Q7L1S5 443 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 ADIPOR2Q86V24 386 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 RNF139Q8WU17 664 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 CYB5D2Q8WUJ1 264 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 BTBD1Q9H0C5 482 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 LRRC4Q9HBW1 653 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 ABCB8Q9NUT2 735 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 DKK4Q9UBT3 224 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 SFMBT1Q9UHJ3 866 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 ANKRD6Q9Y2G4 727 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 SNX11Q9Y5W9 270 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 SLCO1B1Q9Y6L6 691 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 CABIN1Q9Y6J0 2220 aa17.59■□□□□ 0.41
UPF3AP3-201ENST00000420996 KNL1Q8NG31 2342 aa17.58■□□□□ 0.41
UPF3AP3-201ENST00000420996 SEMA4FO95754 770 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 GRIA4P48058 902 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 NDUFA8P51970 172 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 RPS14P62263 151 aaKnown RBP17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 BST2Q10589 180 aaKnown RBP17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 PTPRNQ16849 979 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 GOLGA7BQ2TAP0 167 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 COL28A1Q2UY09 1125 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 SGO2Q562F6 1265 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 PDZD3Q86UT5 571 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 AHI1Q8N157 1196 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 ZNF366Q8N895 744 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 BIRC7Q96CA5 298 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 SPATA32Q96LK8 384 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 IPO9Q96P70 1041 aaKnown RBP17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 TM9SF3Q9HD45 589 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 PRSS16Q9NQE7 514 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 ABCC13Q9NSE7 274 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 HESX1Q9UBX0 185 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 GGA2Q9UJY4 613 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 TSPAN16Q9UKR8 245 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 BTBD3Q9Y2F9 522 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 NBEAQ8NFP9 2946 aa17.58■□□□□ 0.4
UPF3AP3-201ENST00000420996 ATP5BP06576 529 aaKnown RBP17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 DLDP09622 509 aaKnown RBP17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 EPB41P11171 864 aaKnown RBP17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 PABPC1P11940 636 aaKnown RBP17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 ADIGQ0VDE8 80 aa17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 MBLAC2Q68D91 279 aa17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 SCML4Q8N228 414 aa17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 GALNT15Q8N3T1 639 aa17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 KCTD13Q8WZ19 329 aa17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 EDEM1Q92611 657 aa17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 IGSF8Q969P0 613 aa17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 EEF2KMTQ96G04 330 aa17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 IRX2Q9BZI1 471 aaPredicted RBP17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 SGK2Q9HBY8 427 aa17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 SUN2Q9UH99 717 aa17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 COQ4Q9Y3A0 265 aa17.57■□□□□ 0.4
UPF3AP3-201ENST00000420996 YJEFN3A6XGL0 299 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 E7ENQ6 273 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 CETN3O15182 167 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 TNFSF14O43557 240 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 PCDHGA12O60330 932 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 DNTTP04053 509 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 CD27P26842 260 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 YWHAEP62258 255 aaKnown RBP17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 KRT85P78386 507 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 TTC31Q49AM3 519 aaPredicted RBP17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 SOWAHCQ53LP3 525 aaPredicted RBP17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 MPP7Q5T2T1 576 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 KRBA2Q6ZNG9 492 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 ZC3H3Q8IXZ2 948 aaKnown RBP17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 SIX6OS1Q8N1H7 587 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 GOLGA1Q92805 767 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 SCUBE2Q9NQ36 999 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 CNGB3Q9NQW8 809 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 KIAA1257Q9ULG3 409 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 RAXQ9Y2V3 346 aa17.56■□□□□ 0.4
UPF3AP3-201ENST00000420996 ACACAQ13085 2346 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 GOLGA8CPA6NN73 597 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 MSI1O43347 362 aaKnown RBP17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 FSBPO95073 299 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 SETSIPP0DME0 302 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 VDRP11473 427 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 CD19P15391 556 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 POLR2EP19388 210 aaKnown RBP17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 GRK6P43250 576 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 CCT8P50990 548 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 SGSHP51688 502 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 CUL2Q13617 745 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 PIK3R6Q5UE93 754 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms