RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 SPATA13Q96N96 652 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 PHACTR1Q9C0D0 580 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 COPS7BQ9H9Q2 264 aaPredicted RBP16.9■□□□□ 0.3
CRTC3-202ENST00000420329 SLC8A2Q9UPR5 921 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 M0R3G1 203 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 CLASP2O75122 1294 aaKnown RBP16.9■□□□□ 0.3
CRTC3-202ENST00000420329 ZMPSTE24O75844 475 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 VAPBO95292 243 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 TWF1Q12792 350 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 NFYCQ13952 458 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 ZRANB3Q5FWF4 1079 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 PTRHD1Q6GMV3 140 aaKnown RBP16.9■□□□□ 0.3
CRTC3-202ENST00000420329 TMC7Q7Z402 723 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 LRRC15Q8TF66 581 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 PRPF18Q99633 342 aaKnown RBP16.9■□□□□ 0.3
CRTC3-202ENST00000420329 DDX18Q9NVP1 670 aaKnown RBP16.9■□□□□ 0.3
CRTC3-202ENST00000420329 NMRK1Q9NWW6 199 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 ABI2Q9NYB9 513 aaPredicted RBP16.9■□□□□ 0.3
CRTC3-202ENST00000420329 TMEM59LQ9UK28 342 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 SLC13A4Q9UKG4 626 aa16.9■□□□□ 0.3
CRTC3-202ENST00000420329 PLIN4Q96Q06 1357 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 TMEM247A6NEH6 219 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 TMCC1O94876 653 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 CCNE2O96020 404 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 TIGD7Q6NT04 549 aaPredicted RBP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 MON1BQ7L1V2 547 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 RBM22Q9NW64 420 aaKnown RBP eCLIP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 RNF112Q9ULX5 631 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 PHGDHO43175 533 aaKnown RBP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 TADA2AO75478 443 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 PSMB4P28070 264 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 ZC3H12AQ5D1E8 599 aaKnown RBP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 ARCQ7LC44 396 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 L3MBTL3Q96JM7 780 aaPredicted RBP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 LGALS13Q9UHV8 139 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 NKRFO15226 690 aaKnown RBP eCLIP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 MTA2O94776 668 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 ODC1P11926 461 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 AKAP5P24588 427 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 PAN2Q504Q3 1202 aaKnown RBP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 CPNE8Q86YQ8 564 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 BSNDQ8WZ55 320 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 RPRD1AQ96P16 312 aaPredicted RBP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 EBNA1BP2Q99848 306 aaKnown RBP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 THUMPD3Q9BV44 507 aaKnown RBP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 MROH8Q9H579 483 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 GPRC5DQ9NZD1 345 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 PACSIN3Q9UKS6 424 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 CCDC130P13994 396 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 TBCELQ5QJ74 424 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 DCAF12L1Q5VU92 463 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 RNF219Q5W0B1 726 aaPredicted RBP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 ULK2Q8IYT8 1036 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 PIK3R5Q8WYR1 880 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 OPTNQ96CV9 577 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 C12orf65Q9H3J6 166 aaKnown RBP16.89■□□□□ 0.29
CRTC3-202ENST00000420329 RNPEPQ9H4A4 650 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 PCDHGB4Q9UN71 923 aa16.89■□□□□ 0.29
CRTC3-202ENST00000420329 NCF1BA6NI72 391 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 NCF1CA8MVU1 366 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 NCF1P14598 390 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 NUMBP49757 651 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 PTAR1Q7Z6K3 402 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 PLD3Q8IV08 490 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 DCP1BQ8IZD4 617 aaKnown RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 ZSCAN18Q8TBC5 510 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 DDX50Q9BQ39 737 aaKnown RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 APOL5Q9BWW9 433 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 TRPC7Q9HCX4 862 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 PCDHA11Q9Y5I1 949 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 FKBP9O95302 570 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 NPY2RP49146 381 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 C10orf120Q5SQS8 335 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 FKBP9P1Q75LS8 142 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 LPCAT2Q7L5N7 544 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 SEPT5Q99719 369 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 GSC2O15499 205 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 CYP2B6P20813 491 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 RGS4P49798 205 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 PRKAA2P54646 552 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 DGKZQ13574 1117 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 FASTKQ14296 549 aaKnown RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 MAPRE1Q15691 268 aaKnown RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 PTPN20Q4JDL3 420 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 ZNF470Q6ECI4 717 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 CYP2R1Q6VVX0 501 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 OR52K1Q8NGK4 314 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 RIN3Q8TB24 985 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 GTF3C2Q8WUA4 911 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 RBBP8Q99708 897 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 ACO2Q99798 780 aaKnown RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 HIST1H2AGP0C0S8 130 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-202ENST00000420329 HIST1H2ADP20671 130 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 NAGLUP54802 743 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 ACVR2BQ13705 512 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 GALNTL6Q49A17 601 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 DHDDSQ86SQ9 333 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 HIST1H2AHQ96KK5 128 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 HIST1H2AJQ99878 128 aa16.88■□□□□ 0.29
CRTC3-202ENST00000420329 H2AFJQ9BTM1 129 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms