RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 NKX2-8O15522 239 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 PPP6R2O75170 966 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 SLC8A1P32418 973 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 SERPINF1P36955 418 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 RPL15P61313 204 aaKnown RBP5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 GHRHRQ02643 423 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 ZNF91Q05481 1191 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 TRIM60Q495X7 471 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 C10orf62Q5T681 223 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 ANKRD40Q6AI12 368 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 PGBD2Q6P3X8 592 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 PIP4P1Q86T03 277 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 GATAD2AQ86YP4 633 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 RHPN2Q8IUC4 686 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 SCAMP5Q8TAC9 235 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 STT3BQ8TCJ2 826 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 RPL36ALQ969Q0 106 aaKnown RBP5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 COQ8BQ96D53 544 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 SCNM1Q9BWG6 230 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 VPS16Q9H269 839 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 MLXIPQ9HAP2 919 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 MTMR4Q9NYA4 1195 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 GRHPRQ9UBQ7 328 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 CNTN6Q9UQ52 1028 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 ZBTB1Q9Y2K1 713 aa5.09□□□□□ -1.59
HMGB1P49-201ENST00000418882 CACNA1IQ9P0X4 2223 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 SLC38A8A6NNN8 435 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 SKAP2O75563 359 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 CYP21A2P08686 494 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 VEGFAP15692 232 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 RPS6KB1P23443 525 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 SLC37A1P57057 533 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 TAS2R50P59544 299 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 CHAF1AQ13111 956 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 MTA1Q13330 715 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 TRIM14Q14142 442 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 EARS2Q5JPH6 523 aaKnown RBP5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 SULT6B1Q6IMI4 303 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 C16orf71Q8IYS4 520 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 CLEC4CQ8WTT0 213 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 PIGKQ92643 395 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 EID2BQ96D98 161 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 RMDN3Q96TC7 470 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 SENP7Q9BQF6 1050 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 TRNAU1APQ9NX07 287 aaKnown RBP5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 TRPC5Q9UL62 973 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 DAPP1Q9UN19 280 aa5.08□□□□□ -1.6
HMGB1P49-201ENST00000418882 SLC3A2P08195 630 aaKnown RBP5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 CTSAP10619 480 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 CDK4P11802 303 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 SHC2P98077 582 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 ICA1Q05084 483 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 SF3A3Q12874 501 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 RABEP1Q15276 862 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 FAM110CQ1W6H9 321 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 CCDC174Q6PII3 467 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 ZNF474Q6S9Z5 364 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 TTC30AQ86WT1 665 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 NRSN1Q8IZ57 195 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 ADGRF3Q8IZF5 1079 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 CACNA2D3Q8IZS8 1091 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 ZNF48Q96MX3 618 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 CCDC134Q9H6E4 229 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 MOV10Q9HCE1 1003 aaKnown RBP5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 SEPSECSQ9HD40 501 aaKnown RBP5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 LRFN1Q9P244 771 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 MAFFQ9ULX9 164 aa5.07□□□□□ -1.6
HMGB1P49-201ENST00000418882 TTC34A8MYJ7 566 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 TLR2O60603 784 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 CNOT3O75175 753 aaKnown RBP5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 MOSPD3O75425 235 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 CNTN5O94779 1100 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 CSTBP04080 98 aaKnown RBP5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 PRF1P14222 555 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 IGFBP2P18065 325 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 PGM5Q15124 567 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 TRIP6Q15654 476 aaKnown RBP5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 C10orf25Q5T742 122 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 DHRS13Q6UX07 377 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 KIAA1324Q6UXG2 1013 aaKnown RBP5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 ARL14EPQ8N8R7 260 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 WDR60Q8WVS4 1066 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 REXO5Q96IC2 774 aaKnown RBP5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 FAR2Q96K12 515 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 RPS6KC1Q96S38 1066 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 ZNF347Q96SE7 839 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 RTKNQ9BST9 563 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 ARHGAP39Q9C0H5 1083 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 MAGEH1Q9H213 219 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 PABPC3Q9H361 631 aaKnown RBP5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 PRDM8Q9NQV8 689 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 DACT1Q9NYF0 836 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 ELOVL5Q9NYP7 299 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 SLC12A4Q9UP95 1085 aa5.06□□□□□ -1.6
HMGB1P49-201ENST00000418882 SPATA31A5Q5VU36 1347 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 SPATA31A7Q8IWB4 1347 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 PPEF2O14830 753 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 PEX14O75381 377 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 ACTL6BO94805 426 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 HEXIM1O94992 359 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms