RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ADIGQ0VDE8 80 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 PDE1CQ14123 709 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-202ENST00000418310 NCBP2-AS2Q69YL0 99 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 DNAAF3Q8N9W5 541 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 KCNK4Q9NYG8 393 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 TMEM216Q9P0N5 145 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 RPS6KL1Q9Y6S9 549 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 RGPD3A6NKT7 1758 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-202ENST00000418310 RGPD4Q7Z3J3 1758 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 BCLAF3A2AJT9 711 aaKnown RBP12.25□□□□□ -0.45
LIMK1-202ENST00000418310 H3BRB1 525 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 CD1EP15812 388 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 SLC1A6P48664 564 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 TEX44Q53QW1 395 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 C6orf163Q5TEZ5 329 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 WDR75Q8IWA0 830 aaKnown RBP12.25□□□□□ -0.45
LIMK1-202ENST00000418310 SPDYE1Q8NFV5 336 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-202ENST00000418310 OR52K1Q8NGK4 314 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 TFB1MQ8WVM0 346 aaKnown RBP12.25□□□□□ -0.45
LIMK1-202ENST00000418310 LENG1Q96BZ8 264 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-202ENST00000418310 DCPSQ96C86 337 aaKnown RBP12.25□□□□□ -0.45
LIMK1-202ENST00000418310 TUT1Q9H6E5 874 aaKnown RBP12.25□□□□□ -0.45
LIMK1-202ENST00000418310 TAGLN3Q9UI15 199 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 ITGA11Q9UKX5 1188 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 CORO1CQ9ULV4 474 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-202ENST00000418310 PCDHA11Q9Y5I1 949 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 SNX10Q9Y5X0 201 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 SMAPO00193 183 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 TGDSO95455 350 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 LMNAP02545 664 aaKnown RBP12.24□□□□□ -0.45
LIMK1-202ENST00000418310 PROCP04070 461 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 SKIP12755 728 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 CCR10P46092 362 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 POLE2P56282 527 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 STILQ15468 1287 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 PACS1Q6VY07 963 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 TMPRSS6Q8IU80 811 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 CCNJLQ8IV13 435 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 ARHGAP24Q8N264 748 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 SLC35F5Q8WV83 523 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 ZNF669Q96BR6 464 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-202ENST00000418310 KRT82Q9NSB4 513 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 MTMR10Q9NXD2 777 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 SIRPGQ9P1W8 387 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-202ENST00000418310 TXNDC9O14530 226 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 ARHGAP1Q07960 439 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 INCA1Q0VD86 236 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 P2RY11Q96G91 374 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 AGAP2Q99490 1192 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 ZNF670Q9BS34 389 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 PRDM12Q9H4Q4 367 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 KLHL8Q9P2G9 620 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-202ENST00000418310 TIMM13Q9Y5L4 95 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-202ENST00000418310 FAM159BA6NKW6 160 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 DNAJC6O75061 913 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 DGKIO75912 1065 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 RECQL4O94761 1208 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 SP100P23497 879 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-202ENST00000418310 ARRB2P32121 409 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 CCNG1P51959 295 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 CUL3Q13618 768 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 LPCAT4Q643R3 524 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 MTHFD1LQ6UB35 978 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 KDELC2Q7Z4H8 507 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 USP33Q8TEY7 942 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 EMCNQ9ULC0 261 aa12.24□□□□□ -0.45
LIMK1-202ENST00000418310 APOBEC2Q9Y235 224 aaKnown RBP12.24□□□□□ -0.45
LIMK1-202ENST00000418310 M0QYT0 321 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 SPTLC1O15269 473 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 DCXO43602 365 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 HNRNPCL1O60812 293 aaKnown RBP12.23□□□□□ -0.45
LIMK1-202ENST00000418310 BEST1O76090 585 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 ANPEPP15144 967 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 ACADSP16219 412 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 TKTP29401 623 aaKnown RBP12.23□□□□□ -0.45
LIMK1-202ENST00000418310 SERPINB6P35237 376 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 GLRBP48167 497 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 IRF9Q00978 393 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 R3HDM1Q15032 1099 aaKnown RBP12.23□□□□□ -0.45
LIMK1-202ENST00000418310 CFAP157Q5JU67 520 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 PLD6Q8N2A8 252 aaKnown RBP12.23□□□□□ -0.45
LIMK1-202ENST00000418310 RNF148Q8N7C7 305 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 TEKT4Q8WW24 435 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 OPTNQ96CV9 577 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 C7orf26Q96N11 449 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 TUBB6Q9BUF5 446 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 SNX25Q9H3E2 840 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 CAPN14A8MX76 684 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 STK10O94804 968 aaKnown RBP12.23□□□□□ -0.45
LIMK1-202ENST00000418310 ITGA2BP08514 1039 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 GNL1P36915 607 aaPredicted RBP12.23□□□□□ -0.45
LIMK1-202ENST00000418310 AVPR1AP37288 418 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 IFRD2Q12894 506 aaPredicted RBP12.23□□□□□ -0.45
LIMK1-202ENST00000418310 KRT72Q14CN4 511 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 GRIK4Q16099 956 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 NOL9Q5SY16 702 aaKnown RBP12.23□□□□□ -0.45
LIMK1-202ENST00000418310 SYPL2Q5VXT5 272 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms