RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 PGLYRP2Q96PD5 576 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 CORO1BQ9BR76 489 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 HEMGNQ9BXL5 484 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 PARD6BQ9BYG5 372 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 PARD6AQ9NPB6 346 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 STAP1Q9ULZ2 295 aa13.69□□□□□ -0.22
HLA-DMB-258ENST00000418107 MYO16Q9Y6X6 1858 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 F5P12259 2224 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 WDR27A2RRH5 827 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 PRR5-ARHGAP8B1AHC4 643 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 HHLA1C9JL84 531 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 TRIM66O15016 1216 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 TUBBP07437 444 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 RALAP11233 206 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 ELF1P32519 619 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 NOS2P35228 1153 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 MATKP42679 507 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 COPS2P61201 443 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 MRPS25P82663 173 aaKnown RBP13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 ARHGAP8P85298 464 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 SLC25A11Q02978 314 aaKnown RBP13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 SMARCB1Q12824 385 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 KRT81Q14533 505 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 LPAL2Q16609 132 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 RAB41Q5JT25 222 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 FAM78AQ5JUQ0 283 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 PRSS36Q5K4E3 855 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 SH3PXD2AQ5TCZ1 1133 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 KAZNQ674X7 775 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 TRNP1Q6NT89 227 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 VSTM1Q6UX27 236 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 ZNF687Q8N1G0 1237 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 MAGOHBQ96A72 148 aaKnown RBP13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 SLITRK1Q96PX8 696 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 LRRC1Q9BTT6 524 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 OSBPL8Q9BZF1 889 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 DDX47Q9H0S4 455 aaKnown RBP13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 BRD9Q9H8M2 597 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 POPDC2Q9HBU9 364 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 PNPLA8Q9NP80 782 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 TMEM30AQ9NV96 361 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 GMEB2Q9UKD1 530 aa13.68□□□□□ -0.22
HLA-DMB-258ENST00000418107 ZNF638Q14966 1978 aaKnown RBP13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 SYNJ2BP-COX16A0A087WUM0 186 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 TARSL2A2RTX5 802 aaKnown RBP13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 PHF2O75151 1096 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 ABLIM3O94929 683 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 LTFP02788 710 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 TDGF1P13385 188 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 IL1R2P27930 398 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 CCR2P41597 374 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 SLC7A5Q01650 507 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 BOLA3Q53S33 107 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 KCNT1Q5JUK3 1230 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 TXNRD3NBQ6F5E7 133 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 SLC8B1Q6J4K2 584 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 MFSD7Q6UXD7 560 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 SPOCD1Q6ZMY3 1216 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 MAATS1Q7Z4T9 603 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 ARFGAP1Q8N6T3 406 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 ATAD1Q8NBU5 361 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 ZNF461Q8TAF7 563 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 SPPL2BQ8TCT7 592 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 IRGQQ8WZA9 623 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 TBCBQ99426 244 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 TRIM62Q9BVG3 475 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 MAK16Q9BXY0 300 aaKnown RBP13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 FAM126AQ9BYI3 521 aaPredicted RBP13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 CHRDQ9H2X0 955 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 SLITRK6Q9H5Y7 841 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 ANKZF1Q9H8Y5 726 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 CYP4F11Q9HBI6 524 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 ZFP14Q9HCL3 533 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 COX16Q9P0S2 106 aa13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 KMT2BQ9UMN6 2715 aaPredicted RBP13.67□□□□□ -0.22
HLA-DMB-258ENST00000418107 YJEFN3A6XGL0 299 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 E7ENQ6 273 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 M0QYT0 321 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 MAN2B1O00754 1011 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 ERLIN1O75477 346 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 TJP3O95049 919 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 SEC24AO95486 1093 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 RARAP10276 462 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 NCAM1P13591 858 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 KDELR1P24390 212 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 MAGEA11P43364 429 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 CDH6P55285 790 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 SPEM2Q0P670 501 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 GPR17Q13304 367 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 DDR2Q16832 855 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 SLC25A52Q3SY17 297 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 MGAT5BQ3V5L5 792 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 TFDP3Q5H9I0 405 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 SDHAF4Q5VUM1 108 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 BTBD8Q5XKL5 378 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 PDZD4Q76G19 769 aaPredicted RBP13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 RFX6Q8HWS3 928 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 MAP7D3Q8IWC1 876 aa13.66□□□□□ -0.22
HLA-DMB-258ENST00000418107 TCEAL8Q8IYN2 117 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms