RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 C7orf72A4D263 438 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 TRIM64CA6NLI5 447 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 H7C0C1 242 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 KCNN4O15554 427 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 METTL18O95568 372 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 HNRNPCP07910 306 aaKnown RBP eCLIP8.08□□□□□ -1.12
VRK2-203ENST00000417641 POLR2BP30876 1174 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 DPP6P42658 865 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 MAGEA12P43365 314 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 ASPAP45381 313 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 ATP5OP48047 213 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 MYL6P60660 151 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 YWHAEP62258 255 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 MRPS22P82650 360 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 ZNF394Q53GI3 561 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 FSCBQ5H9T9 825 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 FAM47CQ5HY64 1035 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 LRRC8BQ6P9F7 803 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 PACS1Q6VY07 963 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 CROCCP3Q8IVE0 287 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 CEP70Q8NHQ1 597 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 PPP1R14CQ8TAE6 165 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 SNRNP27Q8WVK2 155 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 ZNF597Q96LX8 424 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 LRGUKQ96M69 825 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 ZNF512Q96ME7 567 aaPredicted RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 KLHL32Q96NJ5 620 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 CSRNP1Q96S65 589 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 CPXM1Q96SM3 734 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 PDCD2LQ9BRP1 358 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 OXCT2Q9BYC2 517 aaPredicted RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 ZNF341Q9BYN7 854 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 NIF3L1Q9GZT8 377 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 CDH19Q9H159 772 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 COG4Q9H9E3 785 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 COPS7BQ9H9Q2 264 aaPredicted RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.08□□□□□ -1.12
VRK2-203ENST00000417641 INIPQ9NRY2 104 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 MAP3K20Q9NYL2 800 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 COPG2Q9UBF2 871 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 PPP1R1BQ9UD71 204 aaPredicted RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 DCDC2Q9UHG0 476 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 TPP1O14773 563 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 BCAS2O75934 225 aaPredicted RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 ALDH2P05091 517 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 IDO1P14902 403 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 EIF2AK2P19525 551 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 NCF2P19878 526 aaPredicted RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 PROZP22891 400 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 PIK3R1P27986 724 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 EPHA3P29320 983 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 AP3M2P53677 418 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 PSMC1P62191 440 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 PFKPQ01813 784 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 GRM1Q13255 1194 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 TMED1Q13445 227 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 TFDP2Q14188 446 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 MGAT5BQ3V5L5 792 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 SLC9A4Q6AI14 798 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 CARM1Q86X55 608 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 MCF2L2Q86YR7 1114 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 BRSK2Q8IWQ3 736 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 UNC5BQ8IZJ1 945 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 DSELQ8IZU8 1212 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 CPSF7Q8N684 471 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 TRPC4APQ8TEL6 797 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 DLG3Q92796 817 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 ISL2Q96A47 359 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 ACO2Q99798 780 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 TARS2Q9BW92 718 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 CALN1Q9BXU9 219 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 GLIS2Q9BZE0 524 aaPredicted RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 RNF39Q9H2S5 420 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 DBNDD1Q9H9R9 158 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 LIN28AQ9H9Z2 209 aaKnown RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 PLGRKTQ9HBL7 147 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 XPNPEP3Q9NQH7 507 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 SLC17A6Q9P2U8 582 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 ZNF232Q9UNY5 417 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.08□□□□□ -1.12
VRK2-203ENST00000417641 SIP14410 1827 aa8.08□□□□□ -1.12
VRK2-203ENST00000417641 RGSL1A5PLK6 1076 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 H3BNH8 94 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 RNASEH2AO75792 299 aaKnown RBP8.07□□□□□ -1.12
VRK2-203ENST00000417641 APRTP07741 180 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 RALBP11234 206 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 GRIA1P42261 906 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 CDH6P55285 790 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 TUBA4AP68366 448 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 CTBSQ01459 385 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 PDK1Q15118 436 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 SH3PXD2AQ5TCZ1 1133 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 C16orf89Q6UX73 402 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 WDR49Q8IV35 697 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 TTLL6Q8N841 843 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 ZNF781Q8N8C0 355 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 TSPAN14Q8NG11 270 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 PPP4R1Q8TF05 950 aa8.07□□□□□ -1.12
VRK2-203ENST00000417641 DEPDC1BQ8WUY9 529 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms