RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 PHC3Q8NDX5 983 aa14.92□□□□□ -0.02
HDAC9-208ENST00000417496 SLC2A14Q8TDB8 520 aa14.92□□□□□ -0.02
HDAC9-208ENST00000417496 USP6NLQ92738 828 aa14.92□□□□□ -0.02
HDAC9-208ENST00000417496 FAM149B1Q96BN6 582 aa14.92□□□□□ -0.02
HDAC9-208ENST00000417496 TUT1Q9H6E5 874 aaKnown RBP14.92□□□□□ -0.02
HDAC9-208ENST00000417496 GOLGA2P5Q9HBQ8 144 aa14.92□□□□□ -0.02
HDAC9-208ENST00000417496 XPNPEP3Q9NQH7 507 aa14.92□□□□□ -0.02
HDAC9-208ENST00000417496 PNPOQ9NVS9 261 aa14.92□□□□□ -0.02
HDAC9-208ENST00000417496 CCDC189A1A4V9 331 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 SDR42E2A6NKP2 422 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 SPTLC1O15269 473 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 CREB3O43889 395 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 FGF3P11487 239 aaPredicted RBP14.91□□□□□ -0.02
HDAC9-208ENST00000417496 RAP1GDS1P52306 607 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 PDE1BQ01064 536 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 POU5F1BQ06416 359 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 RALGPS1Q5JS13 557 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 C1orf146Q5VVC0 180 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 PACS1Q6VY07 963 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 MAVSQ7Z434 540 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 CMC1Q7Z7K0 106 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 C10orf107Q8IVU9 208 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 SULF1Q8IWU6 871 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 TNS4Q8IZW8 715 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 EFCAB3Q8N7B9 438 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 GSTCDQ8NEC7 633 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 CENPIQ92674 756 aaPredicted RBP14.91□□□□□ -0.02
HDAC9-208ENST00000417496 MOCOSQ96EN8 888 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 P2RY11Q96G91 374 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 DDX50Q9BQ39 737 aaKnown RBP14.91□□□□□ -0.02
HDAC9-208ENST00000417496 NXF3Q9H4D5 531 aaKnown RBP14.91□□□□□ -0.02
HDAC9-208ENST00000417496 ACSS2Q9NR19 701 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 SETD4Q9NVD3 440 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 PTPRFP10586 1907 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 KCNK1O00180 336 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 RNF103O00237 685 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 MAGEC1O60732 1142 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 TM7SF2O76062 418 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 PSMB4P28070 264 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 SLC1A6P48664 564 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 CBLBQ13191 982 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 RNF220Q5VTB9 566 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 FAM91A1Q658Y4 838 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 DPY19L2Q6NUT2 758 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 IFNLR1Q8IU57 520 aaPredicted RBP14.91□□□□□ -0.02
HDAC9-208ENST00000417496 GPC2Q8N158 579 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 PIWIL2Q8TC59 973 aaKnown RBP14.91□□□□□ -0.02
HDAC9-208ENST00000417496 AZIN2Q96A70 460 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 AGAP3Q96P47 875 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 OXCT2Q9BYC2 517 aaPredicted RBP14.91□□□□□ -0.02
HDAC9-208ENST00000417496 SYBUQ9NX95 663 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 MKS1Q9NXB0 559 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 TMEM216Q9P0N5 145 aa14.91□□□□□ -0.02
HDAC9-208ENST00000417496 LTBP3Q9NS15 1303 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 A0A0A0MRY4 1105 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 PRKCGP05129 697 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 SERPINA6P08185 405 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 DESP17661 470 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 GRM5P41594 1212 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 PTPN9P43378 593 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 NR2C2P49116 596 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 MRPS35P82673 323 aaKnown RBP14.9□□□□□ -0.02
HDAC9-208ENST00000417496 TUBB3Q13509 450 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 LAMC2Q13753 1193 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 LRRC36Q1X8D7 754 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 DCAF6Q58WW2 860 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 SLC26A9Q7LBE3 791 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 ERO1BQ86YB8 467 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 DEFB106AQ8N104 65 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 NME8Q8N427 588 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 SPATA13Q96N96 652 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 PPM1HQ9ULR3 514 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 LRCH1Q9Y2L9 728 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 USP3Q9Y6I4 520 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 A0A0G2JMZ2 1700 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 LRRC37A2A6NM11 1700 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 LOC100653049A0A140TA62 436 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 ARHGAP42A6NI28 874 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 CLDN5O00501 218 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 BIRC5O15392 142 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 PLIN3O60664 434 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 DGKIO75912 1065 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 KRT34O76011 436 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 STAU1O95793 577 aaKnown RBP14.9□□□□□ -0.02
HDAC9-208ENST00000417496 ITGA2BP08514 1039 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 ANPEPP15144 967 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 IGFBP6P24592 240 aaPredicted RBP14.9□□□□□ -0.02
HDAC9-208ENST00000417496 TKTP29401 623 aaKnown RBP14.9□□□□□ -0.02
HDAC9-208ENST00000417496 GNL1P36915 607 aaPredicted RBP14.9□□□□□ -0.02
HDAC9-208ENST00000417496 PSEN1P49768 467 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 NDUFV1P49821 464 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 SERPINB9P50453 376 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 PGGT1BP53609 377 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 PCLAFQ15004 111 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 HACE1Q8IYU2 909 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 ARHGAP24Q8N264 748 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 AGR3Q8TD06 166 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 KBTBD7Q8WVZ9 684 aa14.9□□□□□ -0.02
HDAC9-208ENST00000417496 DCPSQ96C86 337 aaKnown RBP14.9□□□□□ -0.02
HDAC9-208ENST00000417496 PGBD4Q96DM1 585 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms