RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 SUV39H1O43463 412 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 CDKL5O76039 1030 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 CR2P20023 1033 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 ACO1P21399 889 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 PAX3P23760 479 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 TOB1P50616 345 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 PDE6CP51160 858 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 SMTNP53814 917 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 NOP14P78316 857 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 GABREP78334 506 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 KCNA1Q09470 495 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 ENPP2Q13822 863 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 DHX8Q14562 1220 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 IGFBP7Q16270 282 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 ME3Q16798 604 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 C4orf17Q53FE4 359 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 ADALQ6DHV7 355 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 LIMS2Q7Z4I7 341 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 CSGALNACT2Q8N6G5 542 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 SYT2Q8N9I0 419 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 PRCCQ92733 491 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 FBXO32Q969P5 355 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 ELMO3Q96BJ8 720 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 SAAL1Q96ER3 474 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 ELF4Q99607 663 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 REEP2Q9BRK0 252 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 B3GNT5Q9BYG0 378 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 C17orf75Q9HAS0 396 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 BRMS1Q9HCU9 246 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 OSER1Q9NX31 292 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 SERGEFQ9UGK8 458 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 FBXO10Q9UK96 956 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 AGO2Q9UKV8 859 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 PAXBP1Q9Y5B6 917 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 HEMK1Q9Y5R4 338 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 COL27A1Q8IZC6 1860 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 K7ENP7 123 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 PIK3R2O00459 728 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 SDC3O75056 442 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 SEMA4FO95754 770 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 ITGAVP06756 1048 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 KRT19P08727 400 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 PLA2G4BP0C869 781 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 PFKLP17858 780 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 ITGB7P26010 798 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 ANXA13P27216 316 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 OXTRP30559 389 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 MFAP3P55082 362 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 TEAD4Q15561 434 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 BROXQ5VW32 411 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 TDRD10Q5VZ19 366 aaKnown RBP9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 TMEM214Q6NUQ4 689 aaKnown RBP9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 INO80CQ6PI98 192 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 VSTM1Q6UX27 236 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 ZNF574Q6ZN55 896 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 HS2ST1Q7LGA3 356 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 TMEM86AQ8N2M4 240 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 KIAA1958Q8N8K9 716 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 RFFLQ8WZ73 363 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 EXTL1Q92935 676 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 OTUB2Q96DC9 234 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 C8orf48Q96LL4 319 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 ZNF560Q96MR9 790 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 XPO6Q96QU8 1125 aaKnown RBP9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 TSPAN18Q96SJ8 248 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 GDAP2Q9NXN4 497 aa9.12□□□□□ -0.95
NIF3L1-206ENST00000416651 DOCK9Q9BZ29 2069 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 A0A1W2PR77 199 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 FAM47DPA6NHR8 397 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 GNB5O14775 395 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 USP12O75317 370 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 BEST1O76090 585 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 KLKB1P03952 638 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 EPHX1P07099 455 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 C1SP09871 688 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 FAM87AP0C7U9 286 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 ACADMP11310 421 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 ABCB4P21439 1286 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 CD27P26842 260 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 YWHAQP27348 245 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 EPHA8P29322 1005 aaPredicted RBP9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 LHX1P48742 406 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 KCNJ12Q14500 433 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 STARD3Q14849 445 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 KYAT1Q16773 422 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 HECTD3Q5T447 861 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 C4orf50Q6ZRC1 276 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 PAQR9Q6ZVX9 377 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 HTR3DQ70Z44 454 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 ADAT2Q7Z6V5 191 aaKnown RBP9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 DDX42Q86XP3 938 aaKnown RBP eCLIP9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 SPATS2Q86XZ4 545 aaKnown RBP9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 ZC3H3Q8IXZ2 948 aaKnown RBP9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 MYCT1Q8N699 235 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 TOP6BLQ8N6T0 577 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 OR5B17Q8NGF7 314 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 MYCBPAPQ8TBZ2 947 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 CYB5D2Q8WUJ1 264 aa9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 ZNF578Q96N58 590 aaPredicted RBP9.11□□□□□ -0.95
NIF3L1-206ENST00000416651 FAM213AQ9BRX8 229 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms