RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 KLRC2P26717 231 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 CALRP27797 417 aaKnown RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 CCNG1P51959 295 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 CACNA2D1P54289 1103 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 AIF1P55008 147 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 HDAC4P56524 1084 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 SEPT7Q16181 437 aaKnown RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 PDK4Q16654 411 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 SLC39A12Q504Y0 691 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 UBAP2Q5T6F2 1119 aaKnown RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 HHATQ5VTY9 493 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 CYP4V2Q6ZWL3 525 aaPredicted RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 UBE2Q1Q7Z7E8 422 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 CMTR2Q8IYT2 770 aaKnown RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 FITM2Q8N6M3 262 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TEX9Q8N6V9 391 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TTC13Q8NBP0 860 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TRABDQ9H4I3 376 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 CWH43Q9H720 699 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 RC3H2Q9HBD1 1191 aaKnown RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 ETNK1Q9HBU6 452 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 PRDM5Q9NQX1 630 aaPredicted RBP11.97□□□□□ -0.49
RFFL-205ENST00000415395 TMEM30AQ9NV96 361 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 EURLQ9NYK6 297 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 CTNNAL1Q9UBT7 734 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 TBK1Q9UHD2 729 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 STK38LQ9Y2H1 464 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 PCDHB5Q9Y5E4 795 aa11.97□□□□□ -0.49
RFFL-205ENST00000415395 MYO16Q9Y6X6 1858 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 PI4K2BG5E9Z4 385 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 LIASO43766 372 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 TBC1D4O60343 1298 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 ZWINTO95229 277 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 LTFP02788 710 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 TROVE2P10155 538 aaKnown RBP eCLIP11.96□□□□□ -0.49
RFFL-205ENST00000415395 CSF2RAP15509 400 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 TSHRP16473 764 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 VPS41P49754 854 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 ARSEP51690 589 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 CDO1Q16878 200 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 KCTD19Q17RG1 926 aaPredicted RBP11.96□□□□□ -0.49
RFFL-205ENST00000415395 SMTNL2Q2TAL5 461 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 KLHL38Q2WGJ6 581 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 RNF168Q8IYW5 571 aaPredicted RBP11.96□□□□□ -0.49
RFFL-205ENST00000415395 DEFB106AQ8N104 65 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 KCTD6Q8NC69 237 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 SPPL2BQ8TCT7 592 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 MAML1Q92585 1016 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 ALKBH8Q96BT7 664 aaKnown RBP11.96□□□□□ -0.49
RFFL-205ENST00000415395 PGAP3Q96FM1 320 aaPredicted RBP11.96□□□□□ -0.49
RFFL-205ENST00000415395 C8orf48Q96LL4 319 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 PEBP4Q96S96 227 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 SLC9A7Q96T83 725 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 NPY6RQ99463 290 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 PAIP2Q9BPZ3 127 aaKnown RBP11.96□□□□□ -0.49
RFFL-205ENST00000415395 TTPALQ9BTX7 342 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 PRDM16Q9HAZ2 1276 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 IL23AQ9NPF7 189 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 PSMC3IPQ9P2W1 217 aaPredicted RBP11.96□□□□□ -0.49
RFFL-205ENST00000415395 PCSK1NQ9UHG2 260 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 PHTF1Q9UMS5 762 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 ZNF148Q9UQR1 794 aa11.96□□□□□ -0.49
RFFL-205ENST00000415395 ALPK3Q96L96 1907 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 UPP2O95045 317 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 ASMTLO95671 621 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 KRT16P08779 473 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 ITGB8P26012 769 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 NDUFV1P49821 464 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 SULT1E1P49888 294 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 WDR5P61964 334 aaKnown RBP11.95□□□□□ -0.5
RFFL-205ENST00000415395 GPR17Q13304 367 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 TFDP2Q14188 446 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 ZRSR2Q15696 482 aaKnown RBP11.95□□□□□ -0.5
RFFL-205ENST00000415395 USP41Q3LFD5 358 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 ZC3H12AQ5D1E8 599 aaKnown RBP11.95□□□□□ -0.5
RFFL-205ENST00000415395 SH3PXD2AQ5TCZ1 1133 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 BBS12Q6ZW61 710 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 GPRIN1Q7Z2K8 1008 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 APLFQ8IW19 511 aaPredicted RBP11.95□□□□□ -0.5
RFFL-205ENST00000415395 ALLCQ8N6M5 410 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 C9orf72Q96LT7 481 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 CEP295NLQ96MC4 621 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 HERPUD2Q9BSE4 406 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 HEMGNQ9BXL5 484 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 VPS37BQ9H9H4 285 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 DNAJC17Q9NVM6 304 aaKnown RBP11.95□□□□□ -0.5
RFFL-205ENST00000415395 KLHL11Q9NVR0 708 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 STK39Q9UEW8 545 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 R3HDM2Q9Y2K5 976 aaKnown RBP11.95□□□□□ -0.5
RFFL-205ENST00000415395 PTPRSQ13332 1948 aa11.95□□□□□ -0.5
RFFL-205ENST00000415395 TNFRSF10BO14763 440 aa11.94□□□□□ -0.5
RFFL-205ENST00000415395 CAPN9O14815 690 aa11.94□□□□□ -0.5
RFFL-205ENST00000415395 F9P00740 461 aa11.94□□□□□ -0.5
RFFL-205ENST00000415395 RPSAP08865 295 aaKnown RBP11.94□□□□□ -0.5
RFFL-205ENST00000415395 USP17L7P0C7H9 530 aa11.94□□□□□ -0.5
RFFL-205ENST00000415395 CREB1P16220 341 aa11.94□□□□□ -0.5
RFFL-205ENST00000415395 LAG3P18627 525 aa11.94□□□□□ -0.5
RFFL-205ENST00000415395 GRIK1P39086 918 aa11.94□□□□□ -0.5
RFFL-205ENST00000415395 SF3A3Q12874 501 aaKnown RBP eCLIP11.94□□□□□ -0.51e-6■■■■■ 39.1
RFFL-205ENST00000415395 PPIGQ13427 754 aaKnown RBP eCLIP11.94□□□□□ -0.59e-12■■■■□ 24.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms