RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 ATP8A2Q9NTI2 1148 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 DKK3Q9UBP4 350 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 HERC5Q9UII4 1024 aaKnown RBP5.09□□□□□ -1.59
PTPRK-209ENST00000415046 ZNF112Q9UJU3 913 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 ZHX2Q9Y6X8 837 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 PDE4DIPQ5VU43 2346 aa5.09□□□□□ -1.59
PTPRK-209ENST00000415046 KIAA1217Q5T5P2 1943 aa5.09□□□□□ -1.6
PTPRK-209ENST00000415046 FRMPD3Q5JV73 1810 aa5.09□□□□□ -1.6
PTPRK-209ENST00000415046 ROBO3Q96MS0 1386 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 MYH7BA7E2Y1 1941 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 LCTP09848 1927 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 WDR91A4D1P6 747 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 NXPH3O95157 252 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 HNRNPCP07910 306 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTPRK-209ENST00000415046 AKR1B1P15121 316 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 MAP2K2P36507 400 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 HMGCS2P54868 508 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 SSBP2P81877 361 aaPredicted RBP5.08□□□□□ -1.6
PTPRK-209ENST00000415046 AMPD3Q01432 767 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 MAP2K1Q02750 393 aaPredicted RBP5.08□□□□□ -1.6
PTPRK-209ENST00000415046 SREBF2Q12772 1141 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 TBCCQ15814 346 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 SRSF7Q16629 238 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTPRK-209ENST00000415046 CERKLQ49MI3 558 aaPredicted RBP5.08□□□□□ -1.6
PTPRK-209ENST00000415046 THEMIS2Q5TEJ8 643 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 C12orf60Q5U649 245 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 ZNF425Q6IV72 752 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 RUFY2Q8WXA3 655 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 ATRIPQ8WXE1 791 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 RGMAQ96B86 450 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 PCDH12Q9NPG4 1184 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 FEZ2Q9UHY8 353 aaPredicted RBP5.08□□□□□ -1.6
PTPRK-209ENST00000415046 PCDHA3Q9Y5H8 950 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 RAD54BQ9Y620 910 aa5.08□□□□□ -1.6
PTPRK-209ENST00000415046 DOCK5Q9H7D0 1870 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 RAD50Q92878 1312 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 TARM1B6A8C7 271 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 DTNBO60941 627 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 VPS4BO75351 444 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 LATS1O95835 1130 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 FGAP02671 866 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 SLC3A2P08195 630 aaKnown RBP5.07□□□□□ -1.6
PTPRK-209ENST00000415046 ASNSP08243 561 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 HSPD1P10809 573 aaKnown RBP5.07□□□□□ -1.6
PTPRK-209ENST00000415046 CETPP11597 493 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 JUPP14923 745 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 ITGB6P18564 788 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 GCLCP48506 637 aaPredicted RBP5.07□□□□□ -1.6
PTPRK-209ENST00000415046 HK3P52790 923 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 PPATQ06203 517 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 GABPAQ06546 454 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 SPP2Q13103 211 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 SBK1Q52WX2 424 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 BMP2KLQ5H9B9 411 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 ZNF618Q5T7W0 954 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 TATDN1Q6P1N9 297 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 ZNF782Q6ZMW2 699 aaPredicted RBP5.07□□□□□ -1.6
PTPRK-209ENST00000415046 HEATR3Q7Z4Q2 680 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 USP37Q86T82 979 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 TBC1D10CQ8IV04 446 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 ACER1Q8TDN7 264 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 BRI3BPQ8WY22 251 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 CHMP4CQ96CF2 233 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 BRINP2Q9C0B6 783 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 SEMA4CQ9C0C4 833 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 MRPL46Q9H2W6 279 aaKnown RBP5.07□□□□□ -1.6
PTPRK-209ENST00000415046 AS3MTQ9HBK9 375 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 SERHLQ9NQF3 203 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 ARHGEF3Q9NR81 526 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 RNF186Q9NXI6 227 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 SWAP70Q9UH65 585 aa5.07□□□□□ -1.6
PTPRK-209ENST00000415046 ISY1Q9ULR0 285 aaKnown RBP5.07□□□□□ -1.6
PTPRK-209ENST00000415046 NEDD4P46934 1319 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 KRTAP29-1A8MX34 341 aaPredicted RBP5.06□□□□□ -1.6
PTPRK-209ENST00000415046 BTBD19C9JJ37 291 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 RANBP6O60518 1105 aaKnown RBP5.06□□□□□ -1.6
PTPRK-209ENST00000415046 HSPA8P11142 646 aaKnown RBP5.06□□□□□ -1.6
PTPRK-209ENST00000415046 LBX1P52954 281 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 ICA1Q05084 483 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 EIF2B5Q13144 721 aaKnown RBP5.06□□□□□ -1.6
PTPRK-209ENST00000415046 ALX1Q15699 326 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 TREML2Q5T2D2 321 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 CASC1Q6TDU7 716 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 TMEM179Q6ZVK1 233 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 NOL8Q76FK4 1167 aaKnown RBP5.06□□□□□ -1.6
PTPRK-209ENST00000415046 ZNF444Q8N0Y2 327 aaPredicted RBP5.06□□□□□ -1.6
PTPRK-209ENST00000415046 PRR18Q8N4B5 295 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 Q8N9P0 234 aaPredicted RBP5.06□□□□□ -1.6
PTPRK-209ENST00000415046 TBC1D5Q92609 795 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 TNPO1Q92973 898 aaKnown RBP5.06□□□□□ -1.6
PTPRK-209ENST00000415046 REPS1Q96D71 796 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.06□□□□□ -1.6
PTPRK-209ENST00000415046 TMOD4Q9NZQ9 345 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 SPEF1Q9Y4P9 236 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 AFG3L2Q9Y4W6 797 aa5.06□□□□□ -1.6
PTPRK-209ENST00000415046 WDR81Q562E7 1941 aa5.05□□□□□ -1.6
PTPRK-209ENST00000415046 ZMYM6O95789 1325 aa5.05□□□□□ -1.6
PTPRK-209ENST00000415046 TSPY2A6NKD2 308 aa5.05□□□□□ -1.6
PTPRK-209ENST00000415046 M0QYG6 137 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms