RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 HALP42357 657 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 AGTR2P50052 363 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 FAM3BP58499 235 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 POSTNQ15063 836 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 SEC23BQ15437 767 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 PFKFB3Q16875 520 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 GLE1Q53GS7 698 aaKnown RBP4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 ZNF569Q5MCW4 686 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 MEX3CQ5U5Q3 659 aaKnown RBP4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 KIAA1614Q5VZ46 1190 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 GALNT16Q8N428 558 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 THAP4Q8WY91 577 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 CPT1BQ92523 772 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 NUAK2Q9H093 628 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 CCDC134Q9H6E4 229 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 PPCSQ9HAB8 311 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 SAYSD1Q9NPB0 183 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 MORC2Q9Y6X9 1032 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 PLEKHD1A6NEE1 506 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 C3orf70A6NLC5 250 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 H0Y3Z8 333 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 RNF8O76064 485 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 SLC3A2P08195 630 aaKnown RBP4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 DHRS4L1P0CG22 281 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 STAT6P42226 847 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 MCM2P49736 904 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 ARL4CP56559 192 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 TAS2R50P59544 299 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 DMWDQ09019 674 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 CC2D1BQ5T0F9 858 aaKnown RBP4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 RFX8Q6ZV50 586 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 RFX6Q8HWS3 928 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 ANKRD42Q8N9B4 389 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 SRFBP1Q8NEF9 429 aaKnown RBP4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 SPPL3Q8TCT6 385 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 SLC2A12Q8TD20 617 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 HMGB4Q8WW32 186 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D20Q96BZ9 403 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 C5orf34Q96MH7 638 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 TRAPPC9Q96Q05 1148 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 EFHD1Q9BUP0 239 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 TWSG1Q9GZX9 223 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 ABHD16BQ9H3Z7 469 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 G6PC2Q9NQR9 355 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 TMLHEQ9NVH6 421 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 ASNSD1Q9NWL6 643 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 LZTS1Q9Y250 596 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 B3GNT3Q9Y2A9 372 aa4.32□□□□□ -1.72
HMGB1P11-201ENST00000413899 DCAF1Q9Y4B6 1507 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 WDR17Q8IZU2 1322 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 HMX3A6NHT5 357 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 CGB1A6NKQ9 187 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 MASP2O00187 686 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 PPP6CO00743 305 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 RRHO14718 337 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 KAT7O95251 611 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 ALDOAP04075 364 aaKnown RBP4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 CELA2AP08217 269 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 GRK5P34947 590 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 IDUAP35475 653 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 ADD2P35612 726 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 VPS41P49754 854 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 HSF1Q00613 529 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 KPNB1Q14974 876 aaKnown RBP4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 SMAD1Q15797 465 aaKnown RBP4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 FAM110CQ1W6H9 321 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 GALNTL6Q49A17 601 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 COLEC12Q5KU26 742 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 ANKRD40Q6AI12 368 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 DGAT2L7PQ6IED9 249 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 TMEM88Q6PEY1 159 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 SLC39A5Q6ZMH5 540 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 LDHAL6AQ6ZMR3 332 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 TFAP2DQ7Z6R9 452 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 UBE2Q1Q7Z7E8 422 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 ADPRHL1Q8NDY3 354 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 OR6Y1Q8NGX8 325 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 CELF1Q92879 486 aaKnown RBP4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 MAP4K1Q92918 833 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 BRD8Q9H0E9 1235 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 ELAC1Q9H777 363 aaKnown RBP4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 ERVK-5Q9HDB9 667 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 TRPC5Q9UL62 973 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 SLC12A4Q9UP95 1085 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 FRMD4BQ9Y2L6 1034 aa4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 HEMK1Q9Y5R4 338 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D3DA0A087WVF3 549 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D3IA0A087WXS9 549 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D3EA0A087X179 549 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 CYP2D7A0A087X1C5 515 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D3KA0A087X1G2 549 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D3BA6NDS4 549 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D3FA6NER0 549 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 FAM90A20PA6NIJ5 464 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D3LB9A6J9 549 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TFRCP02786 760 aaKnown RBP4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 ENO1P06733 434 aaKnown RBP4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 RFPL3SP0C7P2 107 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D3HP0C7X1 549 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TACR3P29371 465 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms