RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SUZ12Q15022 739 aaKnown RBP12.7□□□□□ -0.38
LIMS2-210ENST00000413578 FOXD4L6Q3SYB3 417 aaPredicted RBP12.7□□□□□ -0.38
LIMS2-210ENST00000413578 KRT39Q6A163 491 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 LAYNQ6UX15 382 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 FOXD4L3Q6VB84 417 aaPredicted RBP12.7□□□□□ -0.38
LIMS2-210ENST00000413578 RSRC2Q7L4I2 434 aaKnown RBP12.7□□□□□ -0.38
LIMS2-210ENST00000413578 FMNL3Q8IVF7 1028 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 FAM186BQ8IYM0 893 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 GALNT15Q8N3T1 639 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 TTC39CQ8N584 583 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 ZNF366Q8N895 744 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 SPRYD3Q8NCJ5 442 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 CYB5D2Q8WUJ1 264 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 NDRG1Q92597 394 aaKnown RBP12.7□□□□□ -0.38
LIMS2-210ENST00000413578 BIRC7Q96CA5 298 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 LMLNQ96KR4 655 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 ULBP1Q9BZM6 244 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 PRSS16Q9NQE7 514 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 OLA1Q9NTK5 396 aaKnown RBP12.7□□□□□ -0.38
LIMS2-210ENST00000413578 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.7□□□□□ -0.38
LIMS2-210ENST00000413578 HBS1LQ9Y450 684 aaKnown RBP12.7□□□□□ -0.38
LIMS2-210ENST00000413578 NUMA1Q14980 2115 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 PTPRBP23467 1997 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 H0Y8X5 98 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 XPO1O14980 1071 aaKnown RBP12.69□□□□□ -0.38
LIMS2-210ENST00000413578 SEMA4FO95754 770 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 IGHV4-34P06331 123 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 DLDP09622 509 aaKnown RBP12.69□□□□□ -0.38
LIMS2-210ENST00000413578 PFKFB1P16118 471 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 CD27P26842 260 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 PSMC2P35998 433 aaKnown RBP12.69□□□□□ -0.38
LIMS2-210ENST00000413578 GRK6P43250 576 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 SGSHP51688 502 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 DNM1Q05193 864 aaKnown RBP12.69□□□□□ -0.38
LIMS2-210ENST00000413578 CYP4F3Q08477 520 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 PKP1Q13835 747 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 TEAD4Q15561 434 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 CHST9Q7L1S5 443 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 SCUBE3Q8IX30 993 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 GUF1Q8N442 669 aaKnown RBP12.69□□□□□ -0.38
LIMS2-210ENST00000413578 WFDC5Q8TCV5 224 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 SNX19Q92543 992 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 MYO19Q96H55 970 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 DNAI2Q9GZS0 605 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 BTBD1Q9H0C5 482 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 SGK2Q9HBY8 427 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 ABCB8Q9NUT2 735 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 USP25Q9UHP3 1055 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 GGA2Q9UJY4 613 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 PLA2G4CQ9UP65 541 aa12.69□□□□□ -0.38
LIMS2-210ENST00000413578 FAM237AA0A1B0GTK4 181 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 YJEFN3A6XGL0 299 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 E7ENQ6 273 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 E9PAM4 449 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 KCNK3O14649 394 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 PABPC1P11940 636 aaKnown RBP12.68□□□□□ -0.38
LIMS2-210ENST00000413578 KRT13P13646 458 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 CMA1P23946 247 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 HARS2P49590 506 aaKnown RBP12.68□□□□□ -0.38
LIMS2-210ENST00000413578 CCT8P50990 548 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 DPYDQ12882 1025 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 ADAM9Q13443 819 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 PKDCCQ504Y2 493 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 FNDC3BQ53EP0 1204 aaKnown RBP12.68□□□□□ -0.38
LIMS2-210ENST00000413578 MPP7Q5T2T1 576 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 ADGRF1Q5T601 910 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 MBLAC2Q68D91 279 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 AHI1Q8N157 1196 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 SCML4Q8N228 414 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 PDCD7Q8N8D1 485 aaKnown RBP12.68□□□□□ -0.38
LIMS2-210ENST00000413578 CCDC150Q8NCX0 1101 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 FBXL13Q8NEE6 735 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 SNX21Q969T3 373 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 TMA16Q96EY4 203 aaKnown RBP12.68□□□□□ -0.38
LIMS2-210ENST00000413578 LRIG1Q96JA1 1093 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 MMRN2Q9H8L6 949 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 RAB20Q9NX57 234 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 SFMBT1Q9UHJ3 866 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 TSPAN16Q9UKR8 245 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 CFAP45Q9UL16 551 aa12.68□□□□□ -0.38
LIMS2-210ENST00000413578 A0A1B0GTQ1 180 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 A0A1B0GVL5 298 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 FAM149AA5PLN7 773 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 MSI1O43347 362 aaKnown RBP12.67□□□□□ -0.38
LIMS2-210ENST00000413578 GABBR2O75899 941 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 IGLV3-27P01718 113 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 DNTTP04053 509 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 CD70P32970 193 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 MXI1P50539 228 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 BCAT1P54687 386 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 RACK1P63244 317 aaKnown RBP12.67□□□□□ -0.38
LIMS2-210ENST00000413578 ARID5AQ03989 594 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 BST2Q10589 180 aaKnown RBP12.67□□□□□ -0.38
LIMS2-210ENST00000413578 GOLGA7BQ2TAP0 167 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 FAM133BQ5BKY9 247 aaKnown RBP12.67□□□□□ -0.38
LIMS2-210ENST00000413578 BSPRYQ5W0U4 402 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 ZNF776Q68DI1 518 aaPredicted RBP12.67□□□□□ -0.38
LIMS2-210ENST00000413578 MSANTD2Q6P1R3 559 aa12.67□□□□□ -0.38
LIMS2-210ENST00000413578 USP30Q70CQ3 517 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms