RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 APOEP02649 317 aa19.56■□□□□ 0.72
TRIM56-202ENST00000412507 FMO1Q01740 532 aa19.56■□□□□ 0.72
TRIM56-202ENST00000412507 CDR2Q01850 454 aa19.56■□□□□ 0.72
TRIM56-202ENST00000412507 NAA35Q5VZE5 725 aa19.56■□□□□ 0.72
TRIM56-202ENST00000412507 ANKS1BQ7Z6G8 1248 aa19.56■□□□□ 0.72
TRIM56-202ENST00000412507 RASSF3Q86WH2 238 aa19.56■□□□□ 0.72
TRIM56-202ENST00000412507 ZDHHC17Q8IUH5 632 aa19.56■□□□□ 0.72
TRIM56-202ENST00000412507 CHPFQ8IZ52 775 aa19.56■□□□□ 0.72
TRIM56-202ENST00000412507 ZNF397Q8NF99 534 aaPredicted RBP19.56■□□□□ 0.72
TRIM56-202ENST00000412507 MDGA1Q8NFP4 955 aa19.56■□□□□ 0.72
TRIM56-202ENST00000412507 MYEOVQ96EZ4 313 aa19.56■□□□□ 0.72
TRIM56-202ENST00000412507 NUCKS1Q9H1E3 243 aaKnown RBP19.56■□□□□ 0.72
TRIM56-202ENST00000412507 DDIT4Q9NX09 232 aa19.56■□□□□ 0.72
TRIM56-202ENST00000412507 XPO7Q9UIA9 1087 aaKnown RBP19.56■□□□□ 0.72
TRIM56-202ENST00000412507 TCRBV21S2A2A0A5A6 115 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 ALDH1A2O94788 518 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 HOXB2P14652 356 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 GBP1P32455 592 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 NOS2P35228 1153 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 RNASE9P60153 205 aaKnown RBP19.55■□□□□ 0.72
TRIM56-202ENST00000412507 ARID5AQ03989 594 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 EIF4EBP2Q13542 120 aaPredicted RBP19.55■□□□□ 0.72
TRIM56-202ENST00000412507 LAIR1Q6GTX8 287 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 SDE2Q6IQ49 451 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 CACNA2D4Q7Z3S7 1137 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 XYLT1Q86Y38 959 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 ERLEC1Q96DZ1 483 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 PRICKLE1Q96MT3 831 aaPredicted RBP19.55■□□□□ 0.72
TRIM56-202ENST00000412507 DDX50Q9BQ39 737 aaKnown RBP19.55■□□□□ 0.72
TRIM56-202ENST00000412507 IRX2Q9BZI1 471 aaPredicted RBP19.55■□□□□ 0.72
TRIM56-202ENST00000412507 CBX8Q9HC52 389 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.55■□□□□ 0.728e-7■■■□□ 15.9
TRIM56-202ENST00000412507 CACNA2D2Q9NY47 1150 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 STIM2Q9P246 746 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 GMEB2Q9UKD1 530 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 INVSQ9Y283 1065 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 GON4LQ3T8J9 2241 aa19.55■□□□□ 0.72
TRIM56-202ENST00000412507 PI4KAP42356 2102 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 WASH3PC4AMC7 463 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 GOLGA8SH3BPF8 625 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 DCLK1O15075 740 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 CYP1A1P04798 512 aaPredicted RBP19.54■□□□□ 0.72
TRIM56-202ENST00000412507 HLA-FP30511 346 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 FILIP1LQ4L180 1135 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 FAM102AQ5T9C2 384 aaPredicted RBP19.54■□□□□ 0.72
TRIM56-202ENST00000412507 TMEM215Q68D42 235 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.54■□□□□ 0.72
TRIM56-202ENST00000412507 KBTBD6Q86V97 674 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 FAM160A2Q8N612 972 aaPredicted RBP19.54■□□□□ 0.72
TRIM56-202ENST00000412507 ATP6V0D2Q8N8Y2 350 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 HJURPQ8NCD3 748 aaPredicted RBP19.54■□□□□ 0.72
TRIM56-202ENST00000412507 MSANTD4Q8NCY6 345 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 WFDC5Q8TCV5 224 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 UCMAQ8WVF2 138 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 HMGB4Q8WW32 186 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 RNF34Q969K3 372 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 BTN2A3PQ96KV6 586 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 NAP1L5Q96NT1 182 aaPredicted RBP19.54■□□□□ 0.72
TRIM56-202ENST00000412507 ELOVL2Q9NXB9 296 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 BCCIPQ9P287 314 aaKnown RBP eCLIP19.54■□□□□ 0.72
TRIM56-202ENST00000412507 RAD54BQ9Y620 910 aa19.54■□□□□ 0.72
TRIM56-202ENST00000412507 A0A1W2PQF6 199 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 TACR2P21452 398 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 MATKP42679 507 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 RPS24P62847 133 aaKnown RBP19.53■□□□□ 0.72
TRIM56-202ENST00000412507 NME3Q13232 169 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 MS4A13Q5J8X5 152 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 MPP7Q5T2T1 576 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 RAP1GAP2Q684P5 730 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 RNF43Q68DV7 783 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 KIAA1211LQ6NV74 962 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 LUZP1Q86V48 1076 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 CHSY1Q86X52 802 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 LGI2Q8N0V4 545 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 CFAP52Q8N1V2 620 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 PGBD3Q8N328 593 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 SORCS1Q8WY21 1168 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 PCDHB18PQ96TA0 734 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 GABRG3Q99928 467 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 ADAM33Q9BZ11 813 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 CIPCQ9C0C6 399 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 ABCB8Q9NUT2 735 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.53■□□□□ 0.72
TRIM56-202ENST00000412507 THAP10Q9P2Z0 257 aaPredicted RBP19.53■□□□□ 0.72
TRIM56-202ENST00000412507 SLC12A6Q9UHW9 1150 aa19.53■□□□□ 0.72
TRIM56-202ENST00000412507 A0A1B0GTH6 734 aa19.52■□□□□ 0.72
TRIM56-202ENST00000412507 TYW5A2RUC4 315 aaKnown RBP19.52■□□□□ 0.72
TRIM56-202ENST00000412507 KCNU1A8MYU2 1149 aa19.52■□□□□ 0.72
TRIM56-202ENST00000412507 M0QYT0 321 aa19.52■□□□□ 0.72
TRIM56-202ENST00000412507 SLC2A3P11169 496 aa19.52■□□□□ 0.72
TRIM56-202ENST00000412507 TFE3P19532 575 aaPredicted RBP19.52■□□□□ 0.72
TRIM56-202ENST00000412507 ABCB4P21439 1286 aa19.52■□□□□ 0.72
TRIM56-202ENST00000412507 CCR1P32246 355 aa19.52■□□□□ 0.72
TRIM56-202ENST00000412507 SCNN1AP37088 669 aa19.52■□□□□ 0.72
TRIM56-202ENST00000412507 EIF4HQ15056 248 aaKnown RBP19.52■□□□□ 0.72
TRIM56-202ENST00000412507 SKOR2Q2VWA4 1001 aaPredicted RBP19.52■□□□□ 0.72
TRIM56-202ENST00000412507 ZSCAN23Q3MJ62 389 aa19.52■□□□□ 0.72
TRIM56-202ENST00000412507 USP39Q53GS9 565 aaKnown RBP19.52■□□□□ 0.72
TRIM56-202ENST00000412507 OTUD1Q5VV17 481 aaPredicted RBP19.52■□□□□ 0.72
TRIM56-202ENST00000412507 MMS22LQ6ZRQ5 1243 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms