RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 C19orf81C9J6K1 198 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 J3KTA2 159 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 VILLO15195 856 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 CD3EAPO15446 510 aaKnown RBP4.91□□□□□ -1.62
BRCA1-204ENST00000412061 TGDSO95455 350 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 CLEC3BP05452 202 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 NR2F1P10589 423 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 UBL4AP11441 157 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 ATP6V1B1P15313 513 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 MST1P26927 711 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 RGS2P41220 211 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 DPP6P42658 865 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 RPS3AP61247 264 aaKnown RBP4.91□□□□□ -1.62
BRCA1-204ENST00000412061 PPARDQ03181 441 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 STK4Q13043 487 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 PDCLQ13371 301 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 DCTN2Q13561 401 aaKnown RBP4.91□□□□□ -1.62
BRCA1-204ENST00000412061 TDGQ13569 410 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 DCTN1Q14203 1278 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 TBCCQ15814 346 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 NFIL3Q16649 462 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 DUSP28Q4G0W2 176 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 DNAJC21Q5F1R6 531 aaKnown RBP4.91□□□□□ -1.62
BRCA1-204ENST00000412061 C1orf141Q5JVX7 400 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 ANO7Q6IWH7 933 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 PLBD1Q6P4A8 553 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 IKBIPQ70UQ0 350 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 PRPF39Q86UA1 669 aaKnown RBP4.91□□□□□ -1.62
BRCA1-204ENST00000412061 PALM2Q8IXS6 379 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 C17orf53Q8N3J3 647 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-204ENST00000412061 FAM109AQ8N4B1 249 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 ZNF276Q8N554 614 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 IL17DQ8TAD2 202 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 DNAJB14Q8TBM8 379 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 DVL3Q92997 716 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-204ENST00000412061 FAM136AQ96C01 138 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 HIC2Q96JB3 615 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 TRIM5Q9C035 493 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 ZCWPW1Q9H0M4 648 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 UNKLQ9H9P5 680 aaKnown RBP4.91□□□□□ -1.62
BRCA1-204ENST00000412061 BRF2Q9HAW0 419 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 IL21RQ9HBE5 538 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 NDUFAF4Q9P032 175 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 HPSEQ9Y251 543 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 GPRASP1Q5JY77 1395 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 PNMA6EA0A0J9YXQ4 647 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 C17orf113A0A1B0GUU1 675 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 EFCAB8A8MWE9 144 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 FYB1O15117 783 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 CCNT2O60583 730 aaKnown RBP4.9□□□□□ -1.63
BRCA1-204ENST00000412061 VIPP01282 170 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 TFRCP02786 760 aaKnown RBP4.9□□□□□ -1.63
BRCA1-204ENST00000412061 LAG3P18627 525 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 GATA3P23771 443 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 PSMA3P25788 255 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 PRKAR1BP31321 381 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 HARS2P49590 506 aaKnown RBP4.9□□□□□ -1.63
BRCA1-204ENST00000412061 MCM2P49736 904 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 PDE6CP51160 858 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 PTCHD3Q3KNS1 767 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 TRIM60Q495X7 471 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 GALNTL6Q49A17 601 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 USP39Q53GS9 565 aaKnown RBP4.9□□□□□ -1.63
BRCA1-204ENST00000412061 CERCAMQ5T4B2 595 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 MANEALQ5VSG8 457 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 LRCH2Q5VUJ6 765 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 METTL6Q8TCB7 284 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 SLC25A43Q8WUT9 341 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-204ENST00000412061 WDR60Q8WVS4 1066 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 EXTL1Q92935 676 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 MYEOVQ96EZ4 313 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 CCDC34Q96HJ3 373 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 FAM227BQ96M60 508 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 ADAM2Q99965 735 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 NCAPGQ9BPX3 1015 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 GPATCH1Q9BRR8 931 aaKnown RBP4.9□□□□□ -1.63
BRCA1-204ENST00000412061 FUZQ9BT04 418 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 AMBRA1Q9C0C7 1298 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 SLC25A18Q9H1K4 315 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 SLC25A32Q9H2D1 315 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 RMI1Q9H9A7 625 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 GBA2Q9HCG7 927 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-204ENST00000412061 ERVK-5Q9HDB9 667 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 TAS2R10Q9NYW0 307 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 CNOT7Q9UIV1 285 aaKnown RBP4.9□□□□□ -1.63
BRCA1-204ENST00000412061 SERTAD3Q9UJW9 196 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 CNTN6Q9UQ52 1028 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 SSX2IPQ9Y2D8 614 aa4.9□□□□□ -1.63
BRCA1-204ENST00000412061 TMEM200CA6NKL6 621 aa4.89□□□□□ -1.63
BRCA1-204ENST00000412061 TNPO2O14787 897 aaKnown RBP4.89□□□□□ -1.63
BRCA1-204ENST00000412061 TUBB4AP04350 444 aa4.89□□□□□ -1.63
BRCA1-204ENST00000412061 CSF1RP07333 972 aa4.89□□□□□ -1.63
BRCA1-204ENST00000412061 PSMA4P25789 261 aaKnown RBP4.89□□□□□ -1.63
BRCA1-204ENST00000412061 SLC5A2P31639 672 aa4.89□□□□□ -1.63
BRCA1-204ENST00000412061 CTCFP49711 727 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-204ENST00000412061 BPIFB3P59826 476 aa4.89□□□□□ -1.63
BRCA1-204ENST00000412061 SLC25A3Q00325 362 aa4.89□□□□□ -1.63
BRCA1-204ENST00000412061 EPS8Q12929 822 aa4.89□□□□□ -1.63
BRCA1-204ENST00000412061 ATP1A4Q13733 1029 aa4.89□□□□□ -1.63
BRCA1-204ENST00000412061 CAMK1Q14012 370 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms