RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 FAXDC2Q96IV6 333 aa18.1■□□□□ 0.49
SMPD4-202ENST00000409031 CISHQ9NSE2 258 aa18.1■□□□□ 0.49
SMPD4-202ENST00000409031 WASF2Q9Y6W5 498 aa18.1■□□□□ 0.49
SMPD4-202ENST00000409031 PSMD12O00232 456 aaPredicted RBP18.09■□□□□ 0.49
SMPD4-202ENST00000409031 SLFN11Q7Z7L1 901 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 EID3Q8N140 333 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 FAM172AQ8WUF8 416 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 PACSIN3Q9UKS6 424 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 HDAC3O15379 428 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 POU4F1Q01851 419 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 RXFP2Q8WXD0 754 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 PREBQ9HCU5 417 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 ANAPC2Q9UJX6 822 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 DOLKQ9UPQ8 538 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 SHPRHQ149N8 1683 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 WNT7AO00755 349 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 KATNA1O75449 491 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 LRPAP1P30533 357 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 POLD3Q15054 466 aaPredicted RBP18.09■□□□□ 0.49
SMPD4-202ENST00000409031 SPANXN3Q5MJ09 141 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 EMC10Q5UCC4 262 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 FAM47BQ8NA70 645 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 POC5Q8NA72 575 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 CLPTM1LQ96KA5 538 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 PRKAG3Q9UGI9 489 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 AAR2Q9Y312 384 aaKnown RBP18.09■□□□□ 0.49
SMPD4-202ENST00000409031 XPAP23025 273 aaPredicted RBP18.09■□□□□ 0.49
SMPD4-202ENST00000409031 DCAF6Q58WW2 860 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 POLNQ7Z5Q5 900 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 AMER2Q8N7J2 671 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 MAGEE2Q8TD90 523 aaPredicted RBP18.09■□□□□ 0.49
SMPD4-202ENST00000409031 SHC3Q92529 594 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 ZNF668Q96K58 619 aaPredicted RBP18.09■□□□□ 0.49
SMPD4-202ENST00000409031 UGT2B28Q9BY64 529 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 DHX33Q9H6R0 707 aaKnown RBP18.09■□□□□ 0.49
SMPD4-202ENST00000409031 GIN1Q9NXP7 522 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 KLHL3Q9UH77 587 aa18.09■□□□□ 0.49
SMPD4-202ENST00000409031 EIF3LQ9Y262 564 aaKnown RBP18.09■□□□□ 0.49
SMPD4-202ENST00000409031 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.08■□□□□ 0.49
SMPD4-202ENST00000409031 AKT1P31749 480 aa18.08■□□□□ 0.49
SMPD4-202ENST00000409031 GRIA3P42263 894 aa18.08■□□□□ 0.49
SMPD4-202ENST00000409031 GOLGA7BQ2TAP0 167 aa18.08■□□□□ 0.49
SMPD4-202ENST00000409031 XRRA1Q6P2D8 792 aa18.08■□□□□ 0.49
SMPD4-202ENST00000409031 HPS1Q92902 700 aa18.08■□□□□ 0.49
SMPD4-202ENST00000409031 KAT5Q92993 513 aa18.08■□□□□ 0.49
SMPD4-202ENST00000409031 GPATCH2LQ9NWQ4 482 aa18.08■□□□□ 0.49
SMPD4-202ENST00000409031 GRHL1Q9NZI5 618 aa18.08■□□□□ 0.49
SMPD4-202ENST00000409031 WDR27A2RRH5 827 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 VWA5AO00534 786 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 ZNF197O14709 1029 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 BAIAP3O94812 1187 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 HK2P52789 917 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 SYTL1Q8IYJ3 562 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 SYT15Q9BQS2 421 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 MMTAG2Q9BU76 263 aaKnown RBP18.08■□□□□ 0.48
SMPD4-202ENST00000409031 EBF3Q9H4W6 596 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 SPAG4Q9NPE6 437 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.08■□□□□ 0.48
SMPD4-202ENST00000409031 VANGL2Q9ULK5 521 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 PPP3CAQ08209 521 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 C19orf18Q8NEA5 215 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 CDH22Q9UJ99 828 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 ASTN1O14525 1302 aa18.08■□□□□ 0.48
SMPD4-202ENST00000409031 NR3C2P08235 984 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 GABRB2P47870 512 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 SERPINH1P50454 418 aaKnown RBP18.07■□□□□ 0.48
SMPD4-202ENST00000409031 MSLNQ13421 630 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-202ENST00000409031 CDH24Q86UP0 819 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 VTA1Q9NP79 307 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 CACNA2D2Q9NY47 1150 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 HOXC10Q9NYD6 342 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 GGA3Q9NZ52 723 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 NKX1-2Q9UD57 310 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-202ENST00000409031 CENPXA8MT69 81 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 OGTO15294 1046 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 FAM20BO75063 409 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 ARPC4P59998 168 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 FMO1Q01740 532 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 TP53BP2Q13625 1128 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 RFWD3Q6PCD5 774 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 SLC9A9Q8IVB4 645 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 EFCAB3Q8N7B9 438 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 C12orf50Q8NA57 414 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-202ENST00000409031 OTUB1Q96FW1 271 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-202ENST00000409031 ACAD9Q9H845 621 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 COQ6Q9Y2Z9 468 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 RAD54BQ9Y620 910 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 TMEM114B3SHH9 223 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 TSPAN9O75954 239 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 MOCS2O96007 188 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-202ENST00000409031 BPGMP07738 259 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 PTGIRP43119 386 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 CCT8P50990 548 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 CCR3P51677 355 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 GEMP55040 296 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 ACTR3P61158 418 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 PDCD4Q53EL6 469 aaKnown RBP18.07■□□□□ 0.48
SMPD4-202ENST00000409031 VSTM1Q6UX27 236 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 ATG16L2Q8NAA4 619 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 FLCNQ8NFG4 579 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms