RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 ASNSD1Q9NWL6 643 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 GGA2Q9UJY4 613 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 CYP8B1Q9UNU6 501 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 INVSQ9Y283 1065 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 PCDHB9Q9Y5E1 797 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 SPAG17Q6Q759 2223 aa13.37□□□□□ -0.27
SNORD88B-201ENST00000408454 GPR179Q6PRD1 2367 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 TMEM8BA6NDV4 472 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 PRRT4C9JH25 899 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 ARHGAP33O14559 1287 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 DFNA5O60443 496 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 HSF2BPO75031 334 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 IGLV3-19P01714 112 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 DESP17661 470 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 ENGP17813 658 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 BCKDHBP21953 392 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 ERCC5P28715 1186 aaPredicted RBP13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 USP8P40818 1118 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 WASP42768 502 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 ZNF234Q14588 700 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 CCDC6Q16204 474 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 MAN2A1Q16706 1144 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 PLEKHG6Q3KR16 790 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 RRAGAQ7L523 313 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 C1orf131Q8NDD1 294 aaKnown RBP13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 RLN3Q8WXF3 142 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 RNF34Q969K3 372 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 PIWIL1Q96J94 861 aaKnown RBP13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 CCDC114Q96M63 670 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 LHX5Q9H2C1 402 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 SGK2Q9HBY8 427 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 KIAA1522Q9P206 1035 aaPredicted RBP13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 STAP1Q9ULZ2 295 aa13.36□□□□□ -0.27
SNORD88B-201ENST00000408454 MYO15AQ9UKN7 3530 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 F5H5T6 163 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 TM4SF5O14894 197 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 LUC7L3O95232 432 aaKnown RBP13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 IGLV3-27P01718 113 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 SRPRAP08240 638 aaKnown RBP13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 BRD2P25440 801 aaKnown RBP13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 HOXD9P28356 352 aaPredicted RBP13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 CCR1P32246 355 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 NUDT1P36639 197 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 STX17P56962 302 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 CAMK2GQ13555 558 aaPredicted RBP13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 UAP1L1Q3KQV9 507 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 FUT11Q495W5 492 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 ZNF776Q68DI1 518 aaPredicted RBP13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 PSAPL1Q6NUJ1 521 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 PMF1Q6P1K2 205 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 TRIM65Q6PJ69 517 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 CHST9Q7L1S5 443 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 ARMCX6Q7L4S7 300 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 FIBINQ8TAL6 211 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 GBP4Q96PP9 640 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 BTBD1Q9H0C5 482 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 USP36Q9P275 1121 aaKnown RBP13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 SFMBT1Q9UHJ3 866 aa13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
SNORD88B-201ENST00000408454 TARSL2A2RTX5 802 aaKnown RBP13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 TBL1XO60907 577 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 F9P00740 461 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 CD44P16070 742 aaKnown RBP13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 HOXC13P31276 330 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 IL12RB1P42701 662 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 PTGER3P43115 390 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 GPD2P43304 727 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 RPL34P49207 117 aaKnown RBP13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 PGFP49763 221 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 RGS7P49802 495 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 AFF3P51826 1226 aaKnown RBP13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 IRX4P78413 519 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 ZNF252P-AS1Q0IIN9 211 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 GEN1Q17RS7 908 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 ZNF423Q2M1K9 1284 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 SLC45A4Q5BKX6 768 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 SH3PXD2AQ5TCZ1 1133 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 PIK3R6Q5UE93 754 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 MBLAC2Q68D91 279 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 USP30Q70CQ3 517 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 TMEM110Q86TL2 294 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 LMO3Q8TAP4 145 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 ZNF606Q8WXB4 792 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 ERCC4Q92889 916 aaPredicted RBP13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 TOE1Q96GM8 510 aaKnown RBP13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 GTPBP2Q9BX10 602 aaKnown RBP13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 NUP62CLQ9H1M0 184 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 FAM204AQ9H8W3 233 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 OSGEPQ9NPF4 335 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 ABCB8Q9NUT2 735 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 PCDHGC3Q9UN70 934 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 CFAP54Q96N23 3096 aa13.34□□□□□ -0.27
SNORD88B-201ENST00000408454 CEP250Q9BV73 2442 aa13.33□□□□□ -0.27
SNORD88B-201ENST00000408454 PLXND1Q9Y4D7 1925 aa13.33□□□□□ -0.28
SNORD88B-201ENST00000408454 LRRC72A6NJI9 287 aa13.33□□□□□ -0.28
SNORD88B-201ENST00000408454 PES1O00541 588 aaKnown RBP13.33□□□□□ -0.28
SNORD88B-201ENST00000408454 MAGEC1O60732 1142 aa13.33□□□□□ -0.28
SNORD88B-201ENST00000408454 ZNF883P0CG24 379 aa13.33□□□□□ -0.28
SNORD88B-201ENST00000408454 ITPKAP23677 461 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms