RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 IL6P05231 212 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 HOXD10P28358 340 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 NFIXQ14938 502 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 POLD3Q15054 466 aaPredicted RBP13.26□□□□□ -0.29
RNF43-201ENST00000407977 SEC23AQ15436 765 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 VPS72Q15906 364 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 PARP6Q2NL67 630 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 TDRD10Q5VZ19 366 aaKnown RBP13.26□□□□□ -0.29
RNF43-201ENST00000407977 ANKS6Q68DC2 871 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 MZT2BQ6NZ67 158 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 C11orf88Q6PI97 169 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 FAM126BQ8IXS8 530 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 FIG4Q92562 907 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 ARMCX1Q9P291 453 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 ANAPC2Q9UJX6 822 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 AP1G2O75843 785 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 JCHAINP01591 159 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 ST3GAL1Q11201 340 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 DDX39BQ13838 428 aaKnown RBP13.26□□□□□ -0.29
RNF43-201ENST00000407977 PDK3Q15120 406 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 MAPK11Q15759 364 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 KCTD21Q4G0X4 260 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 BROXQ5VW32 411 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 ZNF772Q68DY9 489 aaPredicted RBP13.26□□□□□ -0.29
RNF43-201ENST00000407977 ARCQ7LC44 396 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 KRT74Q7RTS7 529 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 DHDDSQ86SQ9 333 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 VAT1Q99536 393 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 COPS7BQ9H9Q2 264 aaPredicted RBP13.26□□□□□ -0.29
RNF43-201ENST00000407977 DDX3XO00571 662 aaKnown RBP eCLIP13.26□□□□□ -0.292e-19■□□□□ 10
RNF43-201ENST00000407977 HS6ST1O60243 411 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 SSTR1P30872 391 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 RPL14P50914 215 aaKnown RBP13.26□□□□□ -0.29
RNF43-201ENST00000407977 CCNG1P51959 295 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 PDK4Q16654 411 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 KCNMB4Q86W47 210 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 POU5F2Q8N7G0 328 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 OR56A4Q8NGH8 313 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 ITFG1Q8TB96 612 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 MAGEC3Q8TD91 643 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 ADGRE3Q9BY15 652 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 ZCWPW1Q9H0M4 648 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 DNAJC18Q9H819 358 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 ACTR8Q9H981 624 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 ARHGEF3Q9NR81 526 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 PNMA8BQ9ULN7 279 aaPredicted RBP13.26□□□□□ -0.29
RNF43-201ENST00000407977 IQSEC2Q5JU85 1478 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 A0A0G2JLW4 131 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 TAF4O00268 1085 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 SNAP91O60641 907 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 MYL12AP19105 171 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 FAAP100Q0VG06 881 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 KLHL17Q6TDP4 642 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 FBXW8Q8N3Y1 598 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 EMILIN2Q9BXX0 1053 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 PHACTR1Q9C0D0 580 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 WDR41Q9HAD4 459 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 NMRK2Q9NPI5 230 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 EFCAB10A6NFE3 127 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 F5H5T6 163 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 NPTXRO95502 500 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 CCNA2P20248 432 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 ITGADQ13349 1161 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 ZNF484Q5JVG2 852 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 CDC73Q6P1J9 531 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 SFRP1Q8N474 314 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 DUSP9Q99956 384 aaKnown RBP13.26□□□□□ -0.29
RNF43-201ENST00000407977 NUAK2Q9H093 628 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 LIMD1Q9UGP4 676 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 DYRK1BQ9Y463 629 aa13.26□□□□□ -0.29
RNF43-201ENST00000407977 APOC4-APOC2K7ER74 178 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 APOC2P02655 101 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 CAPN1P07384 714 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 GSTM1P09488 218 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 BST2Q10589 180 aaKnown RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 TMEM63BQ5T3F8 832 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 ZNF605Q86T29 641 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 LRRC71Q8N4P6 559 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 HTR3CQ8WXA8 447 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 CENPIQ92674 756 aaPredicted RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 SEPT5Q99719 369 aaPredicted RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 AK5Q9Y6K8 562 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 CPSF4O95639 269 aaKnown RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 SLC2A4P14672 509 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 DRD4P21917 467 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 NEK3P51956 506 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 AUHQ13825 339 aaKnown RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 MGAT5BQ3V5L5 792 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 ZNF57Q68EA5 555 aaPredicted RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 CDK20Q8IZL9 346 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 FBXO39Q8N4B4 442 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 OR7A2PQ8NGA2 310 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 SLC35C1Q96A29 364 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 A0A087X1B8 175 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 FAM237AA0A1B0GTK4 181 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 H3BMM5 538 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 ACO1P21399 889 aaKnown RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 ADSSP30520 456 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 PIK3CGP48736 1102 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms