RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ZNF252P-AS1Q0IIN9 211 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 GPS1Q13098 491 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 TRIP13Q15645 432 aaPredicted RBP13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 OASLQ15646 514 aaKnown RBP13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 FAM102AQ5T9C2 384 aaPredicted RBP13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 OR6B2Q6IFH4 312 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 DCLRE1AQ6PJP8 1040 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 GPR149Q86SP6 731 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 RFX6Q8HWS3 928 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 PPIL6Q8IXY8 311 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 SLC35B2Q8TB61 432 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 SLC22A17Q8WUG5 538 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 TEKT4Q8WW24 435 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 HAUS1Q96CS2 278 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 IGSF21Q96ID5 467 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 CPXM1Q96SM3 734 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 SMYD3Q9H7B4 428 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 IGSF9Q9P2J2 1179 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 NCDNQ9UBB6 729 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 WNT16Q9UBV4 365 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 SLC24A2Q9UI40 661 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 USP18Q9UMW8 372 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 SMIM23A6NLE4 172 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 F8W810 466 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 DPYSL4O14531 572 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 ALOX15BO15296 676 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 LRCH4O75427 683 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 KRT10P13645 584 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 ZFXP17010 805 aaPredicted RBP13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 VPS41P49754 854 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 CDH8P55286 799 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 OGDHQ02218 1023 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 LLGL1Q15334 1064 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 KYNUQ16719 465 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 C9orf57Q5W0N0 161 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 ARHGAP17Q68EM7 881 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 ARCQ7LC44 396 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 TADA2BQ86TJ2 420 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 TMEM173Q86WV6 379 aaPredicted RBP13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 C10orf67Q8IYJ2 551 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 CCDC197Q8NCU1 140 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 CXorf38Q8TB03 319 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 EPS8L3Q8TE67 593 aaKnown RBP13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 HASPINQ8TF76 798 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 HERPUD2Q9BSE4 406 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 SDCBP2Q9H190 292 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 ZWILCHQ9H900 591 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 SFXN1Q9H9B4 322 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 ADAM28Q9UKQ2 775 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 SIT1Q9Y3P8 196 aa13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 PDCD11Q14690 1871 aaKnown RBP13.37□□□□□ -0.27
SMARCB1-203ENST00000407082 PIRO00625 290 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 CST8O60676 142 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 SPAG6O75602 509 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 GJB6O95452 261 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 PDGFRAP16234 1089 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 TGM2P21980 687 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 IGFBP6P24592 240 aaPredicted RBP13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 MIPP30301 263 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 CHKAP35790 457 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 SEC24CP53992 1094 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 SLC18A1P54219 525 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 SLC8A3P57103 927 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 KRT81Q14533 505 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 ITIH4Q14624 930 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 ST3GAL2Q16842 350 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 ATP13A4Q4VNC1 1196 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 SCARA3Q6AZY7 606 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 EXOC3L1Q86VI1 746 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 C1orf210Q8IVY1 113 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 C3orf58Q8NDZ4 430 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 JOSD2Q8TAC2 188 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 BCL7CQ8WUZ0 217 aaPredicted RBP13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 GRAMD1AQ96CP6 724 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 SGSM3Q96HU1 749 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 SEC16BQ96JE7 1060 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 ZBP1Q9H171 429 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 SAYSD1Q9NPB0 183 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 MARCH5Q9NX47 278 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 TSPAN16Q9UKR8 245 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 OTOGLQ3ZCN5 2332 aa13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 KMT2BQ9UMN6 2715 aaPredicted RBP13.36□□□□□ -0.27
SMARCB1-203ENST00000407082 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 EXOC1LA0A1B0GW35 172 aa13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 C3orf70A6NLC5 250 aaPredicted RBP13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 TMEM189-UBE2V1I3L0A0 370 aa13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 PPEF2O14830 753 aa13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 ENDOD1O94919 500 aa13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 CPP00450 1065 aa13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 CTSAP10619 480 aa13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 DRD4P21917 467 aa13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 SDC4P31431 198 aa13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 EIF3EP60228 445 aaKnown RBP13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 IFI35P80217 286 aaPredicted RBP13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 OTUD4Q01804 1114 aaKnown RBP13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 SLC6A3Q01959 620 aa13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 LONRF1Q17RB8 773 aa13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 KLHL38Q2WGJ6 581 aa13.35□□□□□ -0.27
SMARCB1-203ENST00000407082 SV2CQ496J9 727 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms