RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 CYP2F1P24903 491 aa15.71■□□□□ 0.11
LIMK2-204ENST00000406516 ATXN1P54253 815 aaKnown RBP15.71■□□□□ 0.11
LIMK2-204ENST00000406516 HDAC4P56524 1084 aa15.71■□□□□ 0.11
LIMK2-204ENST00000406516 SLC6A3Q01959 620 aa15.71■□□□□ 0.11
LIMK2-204ENST00000406516 KPNB1Q14974 876 aaKnown RBP15.71■□□□□ 0.11
LIMK2-204ENST00000406516 TRIM71Q2Q1W2 868 aaKnown RBP15.71■□□□□ 0.11
LIMK2-204ENST00000406516 MROH9Q5TGP6 573 aa15.71■□□□□ 0.11
LIMK2-204ENST00000406516 LPIN3Q9BQK8 851 aa15.71■□□□□ 0.11
LIMK2-204ENST00000406516 NRDE2Q9H7Z3 1164 aa15.71■□□□□ 0.11
LIMK2-204ENST00000406516 DCLRE1BQ9H816 532 aa15.71■□□□□ 0.11
LIMK2-204ENST00000406516 MARCOQ9UEW3 520 aaPredicted RBP15.71■□□□□ 0.11
LIMK2-204ENST00000406516 ZNF180Q9UJW8 692 aa15.71■□□□□ 0.11
LIMK2-204ENST00000406516 LRRC42Q9Y546 428 aa15.71■□□□□ 0.11
LIMK2-204ENST00000406516 SNX9Q9Y5X1 595 aa15.71■□□□□ 0.11
LIMK2-204ENST00000406516 DPYSL4O14531 572 aa15.71■□□□□ 0.1
LIMK2-204ENST00000406516 PPEF2O14830 753 aa15.71■□□□□ 0.1
LIMK2-204ENST00000406516 PAPSS1O43252 624 aaPredicted RBP15.71■□□□□ 0.1
LIMK2-204ENST00000406516 THPOP40225 353 aa15.71■□□□□ 0.1
LIMK2-204ENST00000406516 CHI3L2Q15782 390 aa15.71■□□□□ 0.1
LIMK2-204ENST00000406516 LGSNQ5TDP6 509 aa15.71■□□□□ 0.1
LIMK2-204ENST00000406516 CES4AQ5XG92 561 aa15.71■□□□□ 0.1
LIMK2-204ENST00000406516 ARID3BQ8IVW6 561 aaPredicted RBP15.71■□□□□ 0.1
LIMK2-204ENST00000406516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.71■□□□□ 0.1
LIMK2-204ENST00000406516 TEKT4Q8WW24 435 aa15.71■□□□□ 0.1
LIMK2-204ENST00000406516 KHSRPQ92945 711 aaKnown RBP eCLIP15.71■□□□□ 0.1
LIMK2-204ENST00000406516 E2F7Q96AV8 911 aa15.71■□□□□ 0.1
LIMK2-204ENST00000406516 DHX35Q9H5Z1 703 aaKnown RBP15.71■□□□□ 0.1
LIMK2-204ENST00000406516 TAS2R1Q9NYW7 299 aa15.71■□□□□ 0.1
LIMK2-204ENST00000406516 KIAA1257Q9ULG3 409 aa15.71■□□□□ 0.1
LIMK2-204ENST00000406516 RPL26L1Q9UNX3 145 aaKnown RBP15.71■□□□□ 0.1
LIMK2-204ENST00000406516 NR2E3Q9Y5X4 410 aa15.71■□□□□ 0.1
LIMK2-204ENST00000406516 TRDMT1O14717 391 aaKnown RBP15.7■□□□□ 0.1
LIMK2-204ENST00000406516 KLF11O14901 512 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 KIF1CO43896 1103 aaKnown RBP15.7■□□□□ 0.1
LIMK2-204ENST00000406516 TOP3BO95985 862 aaKnown RBP15.7■□□□□ 0.1
LIMK2-204ENST00000406516 GRIA1P42261 906 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 MDH1BQ5I0G3 518 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 TAF2Q6P1X5 1199 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 CLEC4CQ8WTT0 213 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 ZNF670Q9BS34 389 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 CDHR5Q9HBB8 845 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 TMEM39AQ9NV64 488 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.7■□□□□ 0.1
LIMK2-204ENST00000406516 C2CD2Q9Y426 696 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 TRIM43BA6NCK2 446 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 KRT38O76015 456 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 LUC7L3O95232 432 aaKnown RBP15.7■□□□□ 0.1
LIMK2-204ENST00000406516 CLTBP09497 229 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 CTSHP09668 335 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 ITGB8P26012 769 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 SLC10A2Q12908 348 aaPredicted RBP15.7■□□□□ 0.1
LIMK2-204ENST00000406516 RCN1Q15293 331 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 CCDC6Q16204 474 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 ACSBG2Q5FVE4 666 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 ZNF534Q76KX8 674 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 CDKL3Q8IVW4 592 aaPredicted RBP15.7■□□□□ 0.1
LIMK2-204ENST00000406516 NDUFAF2Q8N183 169 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 TRIM43Q96BQ3 446 aaPredicted RBP15.7■□□□□ 0.1
LIMK2-204ENST00000406516 ANKRD27Q96NW4 1050 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 TBCBQ99426 244 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 PRDM5Q9NQX1 630 aaPredicted RBP15.7■□□□□ 0.1
LIMK2-204ENST00000406516 GINS2Q9Y248 185 aa15.7■□□□□ 0.1
LIMK2-204ENST00000406516 TSPAN1O60635 241 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 GABBR2O75899 941 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 KRT36O76013 467 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 IL1BP01584 269 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 LMNAP02545 664 aaKnown RBP15.69■□□□□ 0.1
LIMK2-204ENST00000406516 MAGEA6P43360 314 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 IRX4P78413 519 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 KRT72Q14CN4 511 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 NUDCD3Q8IVD9 361 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 SIGLEC10Q96LC7 697 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 PPP1R12CQ9BZL4 782 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 RNF19AQ9NV58 838 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 PPARGC1AQ9UBK2 798 aaKnown RBP15.69■□□□□ 0.1
LIMK2-204ENST00000406516 HESX1Q9UBX0 185 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 TBX21Q9UL17 535 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 NME7Q9Y5B8 376 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 TRIP11Q15643 1979 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 MDM4O15151 490 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 HCRTO43612 131 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 CKBP12277 381 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 DESP17661 470 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 CCNFP41002 786 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 BLMHQ13867 455 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 KIZQ2M2Z5 673 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 PKDCCQ504Y2 493 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 ZNF618Q5T7W0 954 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 ATG16L1Q676U5 607 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 C7orf61Q8IZ16 206 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.69■□□□□ 0.1
LIMK2-204ENST00000406516 GSDMBQ8TAX9 411 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 DPF3Q92784 378 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 EBNA1BP2Q99848 306 aaKnown RBP15.69■□□□□ 0.1
LIMK2-204ENST00000406516 SLC4A5Q9BY07 1137 aa15.69■□□□□ 0.1
LIMK2-204ENST00000406516 TRIM6Q9C030 488 aaPredicted RBP15.69■□□□□ 0.1
LIMK2-204ENST00000406516 HMX2A2RU54 273 aa15.68■□□□□ 0.1
LIMK2-204ENST00000406516 SMNDC1O75940 238 aaKnown RBP eCLIP15.68■□□□□ 0.1
LIMK2-204ENST00000406516 ENO1P06733 434 aaKnown RBP15.68■□□□□ 0.1
LIMK2-204ENST00000406516 POU5F1BQ06416 359 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms