RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 RPP30P78346 268 aaKnown RBP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 CAMK1Q14012 370 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 ERCC6LQ2NKX8 1250 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 GRHL2Q6ISB3 625 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 ZNF585AQ6P3V2 769 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 PARS2Q7L3T8 475 aaKnown RBP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 FASTKD5Q7L8L6 764 aaKnown RBP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 ZNF551Q7Z340 670 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 PDILTQ8N807 584 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 ADPRHL1Q8NDY3 354 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 SRFBP1Q8NEF9 429 aaKnown RBP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 ZCCHC10Q8TBK6 192 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 STAMQ92783 540 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 MCRS1Q96EZ8 462 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 CD180Q99467 661 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 NPAS1Q99742 590 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 RNF26Q9BY78 433 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 PDE11AQ9HCR9 933 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 NSMCE4AQ9NXX6 385 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 ORC3Q9UBD5 711 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 DKK2Q9UBU2 259 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 RAB21Q9UL25 225 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 SLC12A4Q9UP95 1085 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 ENTPD2Q9Y5L3 495 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 ARAP1Q96P48 1450 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 ADAMTS20P59510 1910 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 FER1L4A9Z1Z3 1794 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 NESP48681 1621 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 CCDC187A0A096LP49 1063 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 DYTNA2CJ06 578 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 CCDC151A5D8V7 595 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 PGPEP1LA6NFU8 196 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 UNC119BA6NIH7 251 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 TTC34A8MYJ7 566 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 RHOP08100 348 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 TMIGD3P0DMS9 266 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 HSPA1AP0DMV8 641 aaKnown RBP5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 HSPA1BP0DMV9 641 aaKnown RBP5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 ITGAMP11215 1152 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 RPS6KB1P23443 525 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 PRKCHP24723 683 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 DUSP1P28562 367 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 MCM5P33992 734 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 FOLR3P41439 243 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 TAS2R50P59544 299 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 ARF3P61204 181 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 ARF1P84077 181 aaKnown RBP5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 E2F1Q01094 437 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 GALNT2Q10471 571 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 SEC23BQ15437 767 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 CYP1B1Q16678 543 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 RUNDC3AQ59EK9 446 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 SLC9C2Q5TAH2 1124 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 USP51Q70EK9 711 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 C1orf210Q8IVY1 113 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 SFTPA1Q8IWL2 248 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 ABHD11Q8NFV4 315 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 LINS1Q8NG48 757 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 ARRDC3Q96B67 414 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 LENG9Q96B70 501 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 CTHRC1Q96CG8 243 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 APOPT1Q96IL0 206 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 WWC2-AS2Q96NR7 200 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 PRR25Q96S07 402 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 FUZQ9BT04 418 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 KLC2Q9H0B6 622 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 TAOK3Q9H2K8 898 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 CDCP1Q9H5V8 836 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 VEZTQ9HBM0 779 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 ARHGEF3Q9NR81 526 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 KRT84Q9NSB2 600 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 HSF4Q9ULV5 492 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 PCDHA10Q9Y5I2 948 aa5.24□□□□□ -1.57
HMGB3P18-201ENST00000406327 PDS5BQ9NTI5 1447 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 TOPBP1Q92547 1522 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 A0A1W2PPH5 198 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 AGAP5A6NIR3 686 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 PRSS47A8MTI9 375 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 K7ESM1 405 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 M0QYT0 321 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 ZNF213O14771 459 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 CCNT1O60563 726 aaKnown RBP5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 URI1O94763 535 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 SCGB1D1O95968 90 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 CHRM2P08172 466 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 CYP21A2P08686 494 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 CSF1P09603 554 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 NPSP0C0P6 89 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 ALADP13716 330 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 PSMA4P25789 261 aaKnown RBP5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 ABCD3P28288 659 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 CCR9P51686 369 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 FAM3BP58499 235 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 TP53BP2Q13625 1128 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 KRT32Q14532 448 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 GPR162Q16538 588 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 NFIL3Q16649 462 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 ANKRD16Q6P6B7 361 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 Q6ZWC4 215 aa5.23□□□□□ -1.57
HMGB3P18-201ENST00000406327 GPR149Q86SP6 731 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms