RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DNPEPQ9ULA0 475 aa21.75■■□□□ 1.07
TPM1-208ENST00000404484 MUC3AQ02505 3323 aa21.75■■□□□ 1.07
TPM1-208ENST00000404484 C5orf42Q9H799 3197 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 ATP8B1O43520 1251 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 CSH1P0DML2 217 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 CSH2P0DML3 217 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 ATF6P18850 670 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 TAF10Q12962 218 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 NNTQ13423 1086 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 PPP2R5DQ14738 602 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 VEPH1Q14D04 833 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 OASLQ15646 514 aaKnown RBP21.74■■□□□ 1.07
TPM1-208ENST00000404484 GSTA5Q7RTV2 222 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 CCDC89Q8N998 374 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 PCDH19Q8TAB3 1148 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 GPR152Q8TDT2 470 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 AENQ8WTP8 325 aaKnown RBP21.74■■□□□ 1.07
TPM1-208ENST00000404484 HAUS1Q96CS2 278 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 HINFPQ9BQA5 517 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 DAPK3O43293 454 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 CNPP09543 421 aaKnown RBP21.74■■□□□ 1.07
TPM1-208ENST00000404484 SLC2A3P11169 496 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 CCR1P32246 355 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 NR2C2P49116 596 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 EIF4EBP2Q13542 120 aaPredicted RBP21.74■■□□□ 1.07
TPM1-208ENST00000404484 NOMO1Q15155 1222 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 TMEM184AQ6ZMB5 413 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 TADA2BQ86TJ2 420 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 PQLC3Q8N755 202 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 GIPC2Q8TF65 315 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 MSLNLQ96KJ4 702 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 EPAS1Q99814 870 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 TKTL2Q9H0I9 626 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 DPH5Q9H2P9 285 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 CWC15Q9P013 229 aaKnown RBP21.74■■□□□ 1.07
TPM1-208ENST00000404484 NFU1Q9UMS0 254 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 YIPF1Q9Y548 306 aa21.74■■□□□ 1.07
TPM1-208ENST00000404484 TCF20Q9UGU0 1960 aaKnown RBP21.73■■□□□ 1.07
TPM1-208ENST00000404484 PRRG1O14668 218 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 NDC80O14777 642 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 MYBL2P10244 700 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 HCAR3P49019 387 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 EIF3EP60228 445 aaKnown RBP21.73■■□□□ 1.07
TPM1-208ENST00000404484 PLD1Q13393 1074 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 BZW1Q7L1Q6 419 aaKnown RBP21.73■■□□□ 1.07
TPM1-208ENST00000404484 TCEAL8Q8IYN2 117 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 ALLCQ8N6M5 410 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 PLD5Q8N7P1 536 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 STKLD1Q8NE28 680 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 KLHL5Q96PQ7 755 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 FAM118BQ9BPY3 351 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 TRIM31Q9BZY9 425 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.73■■□□□ 1.073e-7■■■□□ 15.3
TPM1-208ENST00000404484 ARHGEF38Q9NXL2 777 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 ASIC3Q9UHC3 531 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 HCFC2Q9Y5Z7 792 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 GREB1Q4ZG55 1949 aa21.73■■□□□ 1.07
TPM1-208ENST00000404484 EEF2KO00418 725 aaKnown RBP21.72■■□□□ 1.07
TPM1-208ENST00000404484 SEC24AO95486 1093 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 ZDHHC11BP0C7U3 371 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 RARGP13631 454 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 HTR7P34969 479 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 TAF12Q16514 161 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 HDXQ7Z353 690 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 ZNF276Q8N554 614 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 BBOF1Q8ND07 529 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 CASP10Q92851 521 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 CAVIN3Q969G5 261 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 HAPLN3Q96S86 360 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 OSBPL2Q9H1P3 480 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 OSER1Q9NX31 292 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 TLR6Q9Y2C9 796 aa21.72■■□□□ 1.07
TPM1-208ENST00000404484 ZNF638Q14966 1978 aaKnown RBP21.72■■□□□ 1.07
TPM1-208ENST00000404484 TEX28O15482 410 aa21.71■■□□□ 1.07
TPM1-208ENST00000404484 SEC31AO94979 1220 aaKnown RBP21.71■■□□□ 1.07
TPM1-208ENST00000404484 PECAM1P16284 738 aaPredicted RBP21.71■■□□□ 1.07
TPM1-208ENST00000404484 GOT1P17174 413 aa21.71■■□□□ 1.07
TPM1-208ENST00000404484 TNNT3P45378 269 aaPredicted RBP21.71■■□□□ 1.07
TPM1-208ENST00000404484 CALCOCO2Q13137 446 aa21.71■■□□□ 1.07
TPM1-208ENST00000404484 SEMA3BQ13214 749 aa21.71■■□□□ 1.07
TPM1-208ENST00000404484 MTA1Q13330 715 aa21.71■■□□□ 1.07
TPM1-208ENST00000404484 MTMR3Q13615 1198 aa21.71■■□□□ 1.07
TPM1-208ENST00000404484 PTCRAQ6ISU1 281 aaPredicted RBP21.71■■□□□ 1.07
TPM1-208ENST00000404484 GSPT2Q8IYD1 628 aaKnown RBP21.71■■□□□ 1.07
TPM1-208ENST00000404484 PYROXD2Q8N2H3 581 aa21.71■■□□□ 1.07
TPM1-208ENST00000404484 COL25A1Q9BXS0 654 aaPredicted RBP21.71■■□□□ 1.07
TPM1-208ENST00000404484 EMILIN2Q9BXX0 1053 aa21.71■■□□□ 1.07
TPM1-208ENST00000404484 WHRNQ9P202 907 aa21.71■■□□□ 1.07
TPM1-208ENST00000404484 MAGED2Q9UNF1 606 aaPredicted RBP21.71■■□□□ 1.07
TPM1-208ENST00000404484 CFAP69A5D8W1 941 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 GRXCR2A6NFK2 248 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 CREB3O43889 395 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 ZNF189O75820 626 aaPredicted RBP21.7■■□□□ 1.06
TPM1-208ENST00000404484 KRT14P02533 472 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 ADH1AP07327 375 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 RBP3P10745 1247 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 KLRC2P26717 231 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 PGFP49763 221 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 KPNA1P52294 538 aaPredicted RBP21.7■■□□□ 1.06
TPM1-208ENST00000404484 EPHB3P54753 998 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms