RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	MCF2	P10911	925 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	HOXA6	P31267	233 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ALDH1A3	P47895	512 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SLC6A11	P48066	632 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MAPKAPK2	P49137	400 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	LIMK1	P53667	647 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	EPHB3	P54753	998 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	OSTN	P61366	133 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	DMP1	Q13316	513 aa	Predicted RBP	7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TEAD2	Q15562	447 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ARHGAP29	Q52LW3	1261 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	EARS2	Q5JPH6	523 aa	Known RBP	7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CACNA2D4	Q7Z3S7	1137 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ZNF605	Q86T29	641 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ITIH5	Q86UX2	942 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	WDR5B	Q86VZ2	330 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SKAP1	Q86WV1	359 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	RALGPS2	Q86X27	583 aa	Predicted RBP	7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	DCP2	Q8IU60	420 aa	Known RBP	7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	EVPL	Q92817	2033 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	EXOC4	Q96A65	974 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TCEAL4	Q96EI5	215 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	LOXL4	Q96JB6	756 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ACAP3	Q96P50	834 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	GCNA	Q96QF7	691 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MTMR9	Q96QG7	549 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	KIFC3	Q9BVG8	833 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	JAM3	Q9BX67	310 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	THG1L	Q9NWX6	298 aa	Known RBP	7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TNFSF13B	Q9Y275	285 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ZC3H12D	A2A288	527 aa	Known RBP	7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	OR6C75	A6NL08	312 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SHISA7	A6NL88	538 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SLC38A8	A6NNN8	435 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	BTBD18	B2RXH4	712 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SPECC1L-ADORA2A	F8WAN1	911 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MED24	O75448	989 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	RASGRP1	O95267	797 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SEC24A	O95486	1093 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	OR52Z1	P0C646	297 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	KCNE1	P15382	129 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MUT	P22033	750 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	RPA1	P27694	616 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MCM7	P33993	719 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CCR2	P41597	374 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	EPHA5	P54756	1037 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SHC2	P98077	582 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	YWHAH	Q04917	246 aa	Predicted RBP	7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	FCHO2	Q0JRZ9	810 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	GRSF1	Q12849	480 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	STRN3	Q13033	797 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SRSF5	Q13243	272 aa	Known RBP	7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ORC2	Q13416	577 aa	Predicted RBP	7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	VEPH1	Q14D04	833 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TAF12	Q16514	161 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	FGD2	Q7Z6J4	655 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	DIS3L2	Q8IYB7	885 aa	Known RBP	7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PCDH19	Q8TAB3	1148 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ZSWIM3	Q96MP5	696 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	RAB34	Q9BZG1	259 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CDT1	Q9H211	546 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	IPPK	Q9H8X2	491 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	GJB4	Q9NTQ9	266 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	RBM12	Q9NTZ6	932 aa	Known RBP	7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	OBP2A	Q9NY56	170 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	KCNG1	Q9UIX4	513 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TPCN1	Q9ULQ1	816 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SLC8A2	Q9UPR5	921 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	YIPF1	Q9Y548	306 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ASB3	Q9Y575	518 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PCDHGA5	Q9Y5G8	931 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MYO10	Q9HD67	2058 aa		7.3	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MYH9	P35579	1960 aa	Known RBP	7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TCRBV16S1A1N1	A0A5B0	115 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MYBPHL	A2RUH7	354 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461		K7ESF4	209 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	XPOT	O43592	962 aa	Known RBP	7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	AKAP3	O75969	853 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	EPN2	O95208	641 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ZNF806	P0C7X5	589 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	HARS	P12081	509 aa	Known RBP	7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	GJA1	P17302	382 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PML	P29590	882 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CCT6A	P40227	531 aa	Known RBP	7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MATR3	P43243	847 aa	Known RBP eCLIP	7.29	□□□□□ -1.24	1e-6	■□□□□ 10.3
CEACAM1-208	ENST00000403461	PEX3	P56589	373 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PRR5	P85299	388 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SLC9A5	Q14940	896 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ELF2	Q15723	593 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PLEKHN1	Q494U1	663 aa	Predicted RBP	7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	XKR4	Q5GH76	650 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	NT5DC1	Q5TFE4	455 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	STPG1	Q5TH74	334 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ARMCX5	Q6P1M9	558 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CD300LG	Q6UXG3	332 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461		Q6ZS52	159 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ZC3H7A	Q8IWR0	971 aa	Known RBP	7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	GAB3	Q8WWW8	586 aa		7.29	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SEC14L1	Q92503	715 aa		7.29	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms