RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 HJURPQ8NCD3 748 aaPredicted RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 ZYG11BQ9C0D3 744 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 RNF39Q9H2S5 420 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 EML4Q9HC35 981 aaKnown RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 IARS2Q9NSE4 1012 aaKnown RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 PCDHA3Q9Y5H8 950 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 MDM4O15151 490 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 FGF10O15520 208 aaPredicted RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 C8AP07357 584 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 GJA5P36382 358 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 NR2C2P49116 596 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 CAPRIN1Q14444 709 aaKnown RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 FSCBQ5H9T9 825 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 ARMC12Q5T9G4 340 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 SPATS2Q86XZ4 545 aaKnown RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 CCNJLQ8IV13 435 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 DAW1Q8N136 415 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 NCLNQ969V3 563 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 KLHL29Q96CT2 875 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 B3GALT6Q96L58 329 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 SPATA16Q9BXB7 569 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 BRD8Q9H0E9 1235 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 STK39Q9UEW8 545 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 CAPN7Q9Y6W3 813 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 A0A1W2PQH9 124 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 SLC29A2Q14542 456 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 KREMEN2Q8NCW0 462 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 LNX1Q8TBB1 728 aaPredicted RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 POLR1EQ9GZS1 481 aaKnown RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 CACNG4Q9UBN1 327 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 DUOX1Q9NRD9 1551 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 TRIM49D1C9J1S8 452 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 MSI1O43347 362 aaKnown RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 GLP2RO95838 553 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 KDELR1P24390 212 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 POLR2LP62875 67 aaKnown RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 SGO1Q5FBB7 561 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 TMC5Q6UXY8 1006 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 ACTRT1Q8TDG2 376 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 PXYLP1Q8TE99 480 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 ZBED3Q96IU2 234 aaPredicted RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 TACO1Q9BSH4 297 aaKnown RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 DRG1Q9Y295 367 aaKnown RBP15.8■□□□□ 0.12
LSS-202ENST00000397728 MYH2Q9UKX2 1941 aa15.8■□□□□ 0.12
LSS-202ENST00000397728 A0A0U1RQF3 1178 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 NRP1O14786 923 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 SLC5A3P53794 718 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 MEA1Q16626 185 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 TMEM192Q8IY95 271 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 ACBD6Q9BR61 282 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 NWD2Q9ULI1 1742 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 MYBPHLA2RUH7 354 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 TAPT1Q6NXT6 567 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 SAE1Q9UBE0 346 aaPredicted RBP15.79■□□□□ 0.12
LSS-202ENST00000397728 TRHDEQ9UKU6 1024 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 TRIM33Q9UPN9 1127 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 SHOC2Q9UQ13 582 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 NUP98P52948 1817 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 OPLAHO14841 1288 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 OPHN1O60890 802 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 CDH17Q12864 832 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 PLCL1Q15111 1095 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 FAM83EQ2M2I3 478 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 ATP13A4Q4VNC1 1196 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 WWOXQ9NZC7 414 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 USP12O75317 370 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 ZWINTO95229 277 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 IL1BP01584 269 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 MYL2P10916 166 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 SPIRE1Q08AE8 756 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 RARS2Q5T160 578 aaKnown RBP15.79■□□□□ 0.12
LSS-202ENST00000397728 LCLAT1Q6UWP7 414 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 AUTS2Q8WXX7 1259 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 COG4Q9H9E3 785 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 STXBP5LQ9Y2K9 1186 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 SPEF2Q9C093 1822 aa15.79■□□□□ 0.12
LSS-202ENST00000397728 NEDD8-MDP1E9PL57 170 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 M0R2N6 131 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 RBL1P28749 1068 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 TBX2Q13207 712 aaPredicted RBP15.78■□□□□ 0.12
LSS-202ENST00000397728 TSNAXIP1Q2TAA8 658 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 FOXR2Q6PJQ5 311 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 PHF13Q86YI8 300 aaPredicted RBP15.78■□□□□ 0.12
LSS-202ENST00000397728 ZSWIM2Q8NEG5 633 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 NDRG1Q92597 394 aaKnown RBP15.78■□□□□ 0.12
LSS-202ENST00000397728 SKA1Q96BD8 255 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 PCED1BQ96HM7 432 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 FCRL2Q96LA5 508 aaPredicted RBP15.78■□□□□ 0.12
LSS-202ENST00000397728 C10orf88Q9H8K7 445 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 FAM153AQ9UHL3 310 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 CAND2O75155 1236 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 MZF1P28698 734 aaPredicted RBP15.78■□□□□ 0.12
LSS-202ENST00000397728 HDAC4P56524 1084 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 PHEXP78562 749 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 TIGD5Q53EQ6 642 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 TTC7BQ86TV6 843 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 FBXO25Q8TCJ0 367 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 BAP1Q92560 729 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 RUBCNQ92622 972 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 APOC4-APOC2K7ER74 178 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms