RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 RNF168Q8IYW5 571 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 PQLC3Q8N755 202 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 TRAPPC12Q8WVT3 735 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 FAR2Q96K12 515 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 RANBP9Q96S59 729 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 IQCGQ9H095 443 aaKnown RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 CWH43Q9H720 699 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 FBXW11Q9UKB1 542 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 TMCO1Q9UM00 188 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 R3HDM2Q9Y2K5 976 aaKnown RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 PLXNA3P51805 1871 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 DCLK1O15075 740 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 EFEMP2O95967 443 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 INHBAP08476 426 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 FAM153BP0C7A2 387 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 ZNF286BP0CG31 522 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 SPRP35270 261 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 PBX3P40426 434 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 OGDHQ02218 1023 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 FAM153CQ494X1 144 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 CFAP157Q5JU67 520 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 RFX8Q6ZV50 586 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 ZBTB33Q86T24 672 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 NLRP14Q86W24 1093 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 NPAS4Q8IUM7 802 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 TFB1MQ8WVM0 346 aaKnown RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 FAM153AQ9UHL3 310 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 GRID1Q9ULK0 1009 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 ARVCFO00192 962 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 DNAJC6O75061 913 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 ASGR1P07306 291 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 SETDB1Q15047 1291 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 KYNUQ16719 465 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 GOLGA7BQ2TAP0 167 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 DEFB115Q30KQ5 88 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 TTMPQ5BVD1 217 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 SPANXN3Q5MJ09 141 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 C10orf62Q5T681 223 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 CRIPAKQ8N1N5 446 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 ARFGAP1Q8N6T3 406 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 OTUB2Q96DC9 234 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 SLC39A13Q96H72 371 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 CCDC114Q96M63 670 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 LRRC4CQ9HCJ2 640 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 SIRPGQ9P1W8 387 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 UXTQ9UBK9 157 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 DNAJB4Q9UDY4 337 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 TFR2Q9UP52 801 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 RWDD3Q9Y3V2 267 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 FAM159BA6NKW6 160 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 CAPN9O14815 690 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 DGKIO75912 1065 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 TROVE2P10155 538 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 TCF3P15923 654 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 MSH2P43246 934 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 SOX10P56693 466 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 ZNF200P98182 395 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 SPOPLQ6IQ16 392 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 LRRC43Q8N309 656 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 OTUD6BQ8N6M0 293 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 VPS39Q96JC1 886 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 ZFP91Q96JP5 570 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 DTLQ9NZJ0 730 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 AFF4Q9UHB7 1163 aaKnown RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 GREB1Q4ZG55 1949 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 HOXA9P31269 272 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 GARSP41250 739 aaKnown RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 DEUP1Q05D60 604 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 SERINC3Q13530 473 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 PIWIL4Q7Z3Z4 852 aaKnown RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 APLFQ8IW19 511 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-206ENST00000397617 DNAJB3Q8WWF6 145 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 APOPT1Q96IL0 206 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 TRIM51Q9BSJ1 452 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 TLR6Q9Y2C9 796 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 ANKRD6Q9Y2G4 727 aa6.04□□□□□ -1.44
PTPRD-206ENST00000397617 TTLL13PA6NNM8 815 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 BAIAP3O94812 1187 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 CTCFP49711 727 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ZNF211Q13398 564 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TRADDQ15628 312 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ZFYVE27Q5T4F4 411 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ACOT1Q86TX2 421 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 DDX42Q86XP3 938 aaKnown RBP eCLIP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TRIB2Q92519 343 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 MAGEH1Q9H213 219 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 KCTD5Q9NXV2 234 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ZNF510Q9Y2H8 683 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 FOXO6A8MYZ6 492 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 RASA4BC9J798 803 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 GOLGA8SH3BPF8 625 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 SLC7A4O43246 635 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 RASA4O43374 803 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 AP1G2O75843 785 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 PRKAR2AP13861 404 aaKnown RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 PLD1Q13393 1074 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 INO80DQ53TQ3 878 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ANKRD20A8PQ5CZ79 823 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 NOMO2Q5JPE7 1267 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 FYB2Q5VWT5 728 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms