RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CCDC50Q8IVM0 306 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 ZDHHC14Q8IZN3 488 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 KCTD6Q8NC69 237 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 KCTD15Q96SI1 283 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 HERPUD2Q9BSE4 406 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 RNF38Q9H0F5 515 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 DHX35Q9H5Z1 703 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 PCDH18Q9HCL0 1135 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.55■□□□□ 0.49e-7■■■□□ 18.5
TSPAN4-205ENST00000397406 HCN4Q9Y3Q4 1203 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 NR2E1Q9Y466 385 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 DENND4AQ7Z401 1863 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 hCG_1818297A0A087WSY0 165 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 A0A1W2PRU2 124 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 SLC12A8A0AV02 714 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 MOSPD3O75425 235 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 FGGP02679 453 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 RHOP08100 348 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 PAFAH1B1P43034 410 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 RING1Q06587 406 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 CKAP4Q07065 602 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 SIGLEC14Q08ET2 396 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 DPYSL3Q14195 570 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 PPP2R5EQ16537 467 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 ARL13BQ3SXY8 428 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 ODF2Q5BJF6 829 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 EFHC2Q5JST6 749 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 CCDC181Q5TID7 509 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 TXNDC8Q6A555 127 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 VSIG1Q86XK7 387 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 SLC13A5Q86YT5 568 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 PYROXD2Q8N2H3 581 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 LEMD2Q8NC56 503 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 SHKBP1Q8TBC3 707 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 TSC1Q92574 1164 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 MRPS31Q92665 395 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 RNF34Q969K3 372 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 SLC22A12Q96S37 553 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 OSBPL8Q9BZF1 889 aa17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 HBS1LQ9Y450 684 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-205ENST00000397406 SPDYE4A6NLX3 237 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 ZNF487B1APH4 448 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 RIOK3O14730 519 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 IL4RP24394 825 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 KPNA1P52294 538 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 NTHL1P78549 312 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 SEMA3BQ13214 749 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 KRT81Q14533 505 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 LLGL1Q15334 1064 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 TFDP3Q5H9I0 405 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 PRSS36Q5K4E3 855 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 PDZD4Q76G19 769 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 GRASPQ7Z6J2 395 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 TCEAL4Q96EI5 215 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 GCNAQ96QF7 691 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 CARD6Q9BX69 1037 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 ATXN3LQ9H3M9 355 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 EFR3BQ9Y2G0 817 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 DOCK4Q8N1I0 1966 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 ZNF318Q5VUA4 2279 aa17.54■□□□□ 0.4
TSPAN4-205ENST00000397406 NUP210Q8TEM1 1887 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 TCRBV7S2A1N4TA0A589 114 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 SLC2A3P11169 496 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 KRT10P13645 584 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 GJA1P17302 382 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 PFKLP17858 780 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 CETN2P41208 172 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 VCPP55072 806 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 MMRN1Q13201 1228 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 KLF1Q13351 362 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 LONRF2Q1L5Z9 754 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 SLC5A9Q2M3M2 681 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 PPP6R3Q5H9R7 873 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 STXBP5Q5T5C0 1151 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 MAP7D3Q8IWC1 876 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 CEP112Q8N8E3 955 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 ARL14EPQ8N8R7 260 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 TDRD5Q8NAT2 981 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 SMG7Q92540 1137 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 PBXIP1Q96AQ6 731 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 FAF2Q96CS3 445 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 ZFRQ96KR1 1074 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 HAPLN3Q96S86 360 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 CYP2S1Q96SQ9 504 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 NAP1L3Q99457 506 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 ZNF670Q9BS34 389 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 KLF16Q9BXK1 252 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 HEMGNQ9BXL5 484 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 CALN1Q9BXU9 219 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 NACA2Q9H009 215 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 OSBPL2Q9H1P3 480 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 TRPC7Q9HCX4 862 aa17.53■□□□□ 0.4
TSPAN4-205ENST00000397406 PAGE1O75459 146 aa17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 APOEP02649 317 aa17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 HMBSP08397 361 aa17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 COG7P83436 770 aa17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 ADCY2Q08462 1091 aa17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 SIX1Q15475 284 aaPredicted RBP17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 MAB21L3Q8N8X9 362 aa17.52■□□□□ 0.4
TSPAN4-205ENST00000397406 LRRN4CLQ8ND94 238 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms