RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TXNRD3NBQ6F5E7 133 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 MFSD7Q6UXD7 560 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 PDZD4Q76G19 769 aaPredicted RBP15.46■□□□□ 0.06
CAPN3-207ENST00000397200 BEND5Q7L4P6 421 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 ARFGAP1Q8N6T3 406 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 RXFP2Q8WXD0 754 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 IL21Q9HBE4 155 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 OSER1Q9NX31 292 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 STAP1Q9ULZ2 295 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 NAALADL1Q9UQQ1 740 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 ANAPC1Q9H1A4 1944 aa15.46■□□□□ 0.06
CAPN3-207ENST00000397200 C2orf16Q68DN1 1984 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 DOCK6Q96HP0 2047 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 TJP3O95049 919 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 FYNP06241 537 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 RARGP13631 454 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 FOSL2P15408 326 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 ACTN2P35609 894 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 EPHA5P54756 1037 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 CAV1Q03135 178 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 SLMAPQ14BN4 828 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 LLGL1Q15334 1064 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 CTC1Q2NKJ3 1217 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 SNX30Q5VWJ9 437 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 TRNP1Q6NT89 227 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 GAREM2Q75VX8 874 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 GRASPQ7Z6J2 395 aaPredicted RBP15.45■□□□□ 0.06
CAPN3-207ENST00000397200 RNF139Q8WU17 664 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 PABPC5Q96DU9 382 aaKnown RBP15.45■□□□□ 0.06
CAPN3-207ENST00000397200 SNF8Q96H20 258 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 CDK5RAP1Q96SZ6 601 aaKnown RBP15.45■□□□□ 0.06
CAPN3-207ENST00000397200 DDX23Q9BUQ8 820 aaKnown RBP15.45■□□□□ 0.06
CAPN3-207ENST00000397200 APOL5Q9BWW9 433 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 HEMGNQ9BXL5 484 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 ATXN3LQ9H3M9 355 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.45■□□□□ 0.06
CAPN3-207ENST00000397200 ATP8A1Q9Y2Q0 1164 aa15.45■□□□□ 0.06
CAPN3-207ENST00000397200 A6NNZ2 444 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 DPYSL4O14531 572 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 LIASO43766 372 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 KRT7P08729 469 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 MYZAPP0CAP1 466 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 GJC1P36383 396 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 SSR1P43307 286 aaKnown RBP15.44■□□□□ 0.06
CAPN3-207ENST00000397200 ZNF143P52747 638 aaPredicted RBP15.44■□□□□ 0.06
CAPN3-207ENST00000397200 ADCY2Q08462 1091 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 CALCOCO2Q13137 446 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 SNX1Q13596 522 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 TUBB8Q3ZCM7 444 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 TFDP3Q5H9I0 405 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 SYPL2Q5VXT5 272 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 SYCE2Q6PIF2 218 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 TMEM150AQ86TG1 271 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 TADA2BQ86TJ2 420 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 SH2D3CQ8N5H7 860 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 OR2W6PQ8NHA6 318 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 RAPGEF5Q92565 580 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 MRPS31Q92665 395 aaKnown RBP15.44■□□□□ 0.06
CAPN3-207ENST00000397200 RNF25Q96BH1 459 aaPredicted RBP15.44■□□□□ 0.06
CAPN3-207ENST00000397200 CFAP57Q96MR6 1250 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 GUCD1Q96NT3 240 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 TMEM109Q9BVC6 243 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 OLA1Q9NTK5 396 aaKnown RBP15.44■□□□□ 0.06
CAPN3-207ENST00000397200 KLHL11Q9NVR0 708 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 RRN3Q9NYV6 651 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 CLEC1BQ9P126 229 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 NOTCH4Q99466 2003 aa15.44■□□□□ 0.06
CAPN3-207ENST00000397200 A0A1W2PRU2 124 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 GOLGA6L10A6NI86 522 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 PI4K2BG5E9Z4 385 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 ZNF197O14709 1029 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 TLR5O60602 858 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 TBX10O75333 385 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 PCK1P35558 622 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 PTPN9P43378 593 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 SULT1E1P49888 294 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 TUBP50607 506 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 NTHL1P78549 312 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 LMNB2Q03252 620 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 COL19A1Q14993 1142 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 OASLQ15646 514 aaKnown RBP15.43■□□□□ 0.06
CAPN3-207ENST00000397200 SLC25A52Q3SY17 297 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 CCDC14Q49A88 953 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 C10orf120Q5SQS8 335 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 HECTD3Q5T447 861 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 GPR149Q86SP6 731 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 DQX1Q8TE96 717 aaKnown RBP15.43■□□□□ 0.06
CAPN3-207ENST00000397200 NKD2Q969F2 451 aaPredicted RBP15.43■□□□□ 0.06
CAPN3-207ENST00000397200 CNPY3Q9BT09 278 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 FRMD8P1Q9BZ68 369 aaPredicted RBP15.43■□□□□ 0.06
CAPN3-207ENST00000397200 NACA2Q9H009 215 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 CCSER2Q9H7U1 834 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 ASIC3Q9UHC3 531 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 NUDT5Q9UKK9 219 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 DRG1Q9Y295 367 aaKnown RBP15.43■□□□□ 0.06
CAPN3-207ENST00000397200 KRT10P13645 584 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 NR1D1P20393 614 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 IL1R2P27930 398 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 CCR2P41597 374 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 CYP4F8P98187 520 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms