RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ADGRA2Q96PE1 1338 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 GOLGB1Q14789 3259 aaKnown RBP9.44□□□□□ -0.9
CAPN3-206ENST00000397163 ATG7O95352 703 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 ITGAXP20702 1163 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 FDFT1P37268 417 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 GABRB2P47870 512 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 ALDH1A3P47895 512 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 IDH3AP50213 366 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 SERPINB8P50452 374 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 GSTM4Q03013 218 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 ITGA9Q13797 1035 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 C16orf72Q14CZ0 275 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 SMAD1Q15797 465 aaKnown RBP9.44□□□□□ -0.9
CAPN3-206ENST00000397163 CASC4Q6P4E1 433 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 FBXW8Q8N3Y1 598 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 SMYD1Q8NB12 490 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 RNF169Q8NCN4 708 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 ATP2A3Q93084 1043 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 RNF157Q96PX1 679 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 BTBD9Q96Q07 612 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 LHX5Q9H2C1 402 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 Q9H521 79 aa9.44□□□□□ -0.9
CAPN3-206ENST00000397163 STN1Q9H668 368 aaKnown RBP9.44□□□□□ -0.9
CAPN3-206ENST00000397163 PPP1R1BQ9UD71 204 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-206ENST00000397163 SF3B1O75533 1304 aaKnown RBP eCLIP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 FAM159BA6NKW6 160 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 APOL1O14791 398 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 MAFGO15525 162 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 DCXO43602 365 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 HMGCRP04035 888 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 SERPINE1P05121 402 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 PIM1P11309 404 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 FGF3P11487 239 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 RPL5P46777 297 aaKnown RBP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 CD97P48960 835 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 CDH8P55286 799 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 PDK1Q15118 436 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 CNGA3Q16281 694 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 C15orf59Q2T9L4 293 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 CCDC92Q53HC0 331 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 RAB6CQ53S08 254 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 ABHD15Q6UXT9 468 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 FRMD7Q6ZUT3 714 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 TMC7Q7Z402 723 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 CPNE9Q8IYJ1 553 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 PLD5Q8N7P1 536 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 LRRC39Q96DD0 335 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 EBNA1BP2Q99848 306 aaKnown RBP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 RAB6CQ9H0N0 254 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 SCN9AQ15858 1988 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 H0YIN7 160 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 NDUFB5O43674 189 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 GRAP2O75791 330 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 SUPT20HL2P0C7V6 817 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 PDGFRAP16234 1089 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 L1CAMP32004 1257 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 CA8P35219 290 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 ASPAP45381 313 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 OSTNP61366 133 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 LPIN1Q14693 890 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 MAP7D1Q3KQU3 841 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 SUPT20HL1Q3ZLR7 823 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 ZNF362Q5T0B9 420 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 XRRA1Q6P2D8 792 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 AMIGO2Q86SJ2 522 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 UNC5BQ8IZJ1 945 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 PHTF2Q8N3S3 785 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 SLC4A11Q8NBS3 891 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 TFB1MQ8WVM0 346 aaKnown RBP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 KCNK16Q96T55 309 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 DHX33Q9H6R0 707 aaKnown RBP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 SLC17A6Q9P2U8 582 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 ARHGAP26Q9UNA1 814 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 WDR37Q9Y2I8 494 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 CNTNAP1P78357 1384 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 YDJCA8MPS7 323 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 M0QYV0 167 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 TPP1O14773 563 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 SPTLC1O15269 473 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 GLRA3O75311 464 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 TNNC2P02585 160 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 GPD1P21695 349 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 ARL2P36404 184 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 ENTPD1P49961 510 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 CYTH1Q15438 398 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 MAVSQ7Z434 540 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 NANOGNBQ7Z5D8 188 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 C10orf107Q8IVU9 208 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 PQLC1Q8N2U9 271 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 FNDC8Q8TC99 324 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 RXFP2Q8WXD0 754 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 LZICQ8WZA0 190 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 LPAR1Q92633 364 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 DCUN1D1Q96GG9 259 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 SIGLEC10Q96LC7 697 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 FAM96AQ9H5X1 160 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 NGRNQ9NPE2 291 aaKnown RBP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 ZNF302Q9NR11 478 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 SELENONQ9NZV5 590 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 SCAF8Q9UPN6 1271 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms