RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 DNAJC9Q8WXX5 260 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 ATP6V1E2Q96A05 226 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 PPWD1Q96BP3 646 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 TSPAN17Q96FV3 270 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 CELF6Q96J87 481 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 ELMO2Q96JJ3 720 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 CSPG4P5Q96PW8 444 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 LGMNQ99538 433 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 DUSP16Q9BY84 665 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 NUF2Q9BZD4 464 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 UBP1Q9NZI7 540 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 TRPV2Q9Y5S1 764 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 MANSC4A6NHS7 340 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 ERI2A8K979 691 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 CLGNO14967 610 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 PAPSS1O43252 624 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 SMIM24O75264 130 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 USP12O75317 370 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 SERPINE1P05121 402 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 USP17L7P0C7H9 530 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 SKIV2L2P42285 1042 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 NPY2RP49146 381 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 COPAP53621 1224 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 NCALDP61601 193 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 MRPS5P82675 430 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 NAB1Q13506 487 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 EFTUD2Q15029 972 aaKnown RBP eCLIP6.74□□□□□ -1.33
BDNF-203ENST00000395978 SLC25A52Q3SY17 297 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 HSP90AA5PQ58FG0 334 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 SPANXN3Q5MJ09 141 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 GRTP1Q5TC63 336 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 CES3Q6UWW8 571 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 RGS9BPQ6ZS82 235 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 RPAINQ86UA6 219 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 ZDHHC14Q8IZN3 488 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 SLC25A41Q8N5S1 370 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 TOP6BLQ8N6T0 577 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 CCDC97Q96F63 343 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 OXNAD1Q96HP4 312 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 KCNK16Q96T55 309 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 EIF2AQ9BY44 585 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 HAPLN2Q9GZV7 340 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 TRPV6Q9H1D0 765 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 SLC24A3Q9HC58 644 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 DMAP1Q9NPF5 467 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 IARS2Q9NSE4 1012 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 CPSF2Q9P2I0 782 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 RABGEF1Q9UJ41 708 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 MYH4Q9Y623 1939 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 C2CD2LO14523 706 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 HMBSP08397 361 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 SMPD1P17405 629 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 TPH1P17752 444 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 ERCC2P18074 760 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 PSMB4P28070 264 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 CCR1P32246 355 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 RAB27AP51159 221 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 FCGRTP55899 365 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 FKBP1BP68106 108 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 CRADDP78560 199 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 CDH17Q12864 832 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 NFE2Q16621 373 aaPredicted RBP6.73□□□□□ -1.33
BDNF-203ENST00000395978 SH2D4BQ5SQS7 431 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 WASHC2DQ5SRD0 308 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 SMYD5Q6GMV2 418 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 RHBDF2Q6PJF5 856 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 ANKRD23Q86SG2 305 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 SPATA24Q86W54 205 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 ARHGAP18Q8N392 663 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 FITM2Q8N6M3 262 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 HASPINQ8TF76 798 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 SOCS4Q8WXH5 440 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 MAML3Q96JK9 1138 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 L3MBTL3Q96JM7 780 aaPredicted RBP6.73□□□□□ -1.33
BDNF-203ENST00000395978 GLT1D1Q96MS3 346 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 BTBD10Q9BSF8 475 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 OSBPL1AQ9BXW6 950 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 TXLNGYQ9BZA5 131 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 KCNK4Q9NYG8 393 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 SLC17A7Q9P2U7 560 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 FETUBQ9UGM5 382 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 TAGLN3Q9UI15 199 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 ADGRA2Q96PE1 1338 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 CLDN5O00501 218 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 TMEM63AO94886 807 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 ASMTLO95671 621 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 CHEK2O96017 543 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 HSPA8P11142 646 aaKnown RBP6.73□□□□□ -1.33
BDNF-203ENST00000395978 TPD52P55327 224 aaPredicted RBP6.73□□□□□ -1.33
BDNF-203ENST00000395978 WDR4P57081 412 aaKnown RBP6.73□□□□□ -1.33
BDNF-203ENST00000395978 BST1Q10588 318 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 BNIP1Q12981 228 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 ITGA9Q13797 1035 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 RCN1Q15293 331 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 SH3PXD2AQ5TCZ1 1133 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 TIGD7Q6NT04 549 aaPredicted RBP6.73□□□□□ -1.33
BDNF-203ENST00000395978 CXCL17Q6UXB2 119 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 ECHDC2Q86YB7 292 aa6.73□□□□□ -1.33
BDNF-203ENST00000395978 TMPRSS6Q8IU80 811 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms