RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 RPL7AP62424 266 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SMTNL2Q2TAL5 461 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PTPN20Q4JDL3 420 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TEDDM1Q5T9Z0 273 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 KCNT2Q6UVM3 1135 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 FRA10AC1Q70Z53 315 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SDCCAG3Q96C92 435 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CAPNS2Q96L46 248 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM121Q9BTD3 319 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SLC4A5Q9BY07 1137 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ELAC1Q9H777 363 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ANKZF1Q9H8Y5 726 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 VCX3AQ9NNX9 186 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ABI2Q9NYB9 513 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TRIM10Q9UDY6 481 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 EPHB6O15197 1021 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MAGEA9P43362 315 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 IRX5P78411 483 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HNRNPDQ14103 355 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ARHGEF7Q14155 803 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 C10orf120Q5SQS8 335 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CHSY1Q86X52 802 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 VPS37AQ8NEZ2 397 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 OSCP1Q8WVF1 389 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SEC14L1Q92503 715 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PKD2L2Q9NZM6 624 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 RPL26L1Q9UNX3 145 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PRG3Q9Y2Y8 225 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 STARD13Q9Y3M8 1113 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ATXN2Q99700 1313 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 KPNA5O15131 536 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 NCK2O43639 380 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MICAL2O94851 1124 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HIST1H2AGP0C0S8 130 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HIST1H2ADP20671 130 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 DPYSL2Q16555 572 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 INSCQ1MX18 579 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 AASDHQ4L235 1098 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PDPK2PQ6A1A2 396 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SLC22A9Q8IVM8 553 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PARP9Q8IXQ6 854 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ANKRD42Q8N9B4 389 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HIST1H2AHQ96KK5 128 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HIST1H2AJQ99878 128 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HAUS8Q9BT25 410 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 H2AFJQ9BTM1 129 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TRABDQ9H4I3 376 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CENPFP49454 3210 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PI4K2BG5E9Z4 385 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TREHO43280 583 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 STMN1P16949 149 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 LAG3P18627 525 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 IFNA8P32881 189 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SKIV2L2P42285 1042 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PIK3CGP48736 1102 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CRHR2Q13324 411 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 NBPF20Q3BBV1 942 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 DUPD1Q68J44 220 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 DSG4Q86SJ6 1040 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PCYOX1LQ8NBM8 494 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 RMDN1Q96DB5 314 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ZBTB45Q96K62 511 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MRPL17Q9NRX2 175 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 THG1LQ9NWX6 298 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM59LQ9UK28 342 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PLA2G4CQ9UP65 541 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM150BA6NC51 233 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CLDN11O75508 207 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 RARAP10276 462 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PROZP22891 400 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 FAM131BQ86XD5 332 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 RAPGEF5Q92565 580 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF558Q96NG5 402 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ZIM3Q96PE6 472 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PPP1R16BQ96T49 567 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 DNMT3LQ9UJW3 386 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ACOT9Q9Y305 439 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ATRXP46100 2492 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ARID1AO14497 2285 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ADGRA3Q8IWK6 1321 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 KANSL1LA0AUZ9 987 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ZBBXA8MT70 800 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SMIM24O75264 130 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 NDUFS3O75489 264 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CST3P01034 146 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CRABP2P29373 138 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TM4SF4P48230 202 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SERPINB8P50452 374 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SP2Q02086 613 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MPP3Q13368 585 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ITIH4Q14624 930 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MMEL1Q495T6 779 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SPANXN3Q5MJ09 141 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 C17orf99Q6UX52 265 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PIWIL4Q7Z3Z4 852 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TDRPQ86YL5 185 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 GPR65Q8IYL9 337 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 LMO3Q8TAP4 145 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PIP4K2CQ8TBX8 421 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ALG3Q92685 438 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms